Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04091

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
4,588,690	+		MIT1002_04090	0.13	-1.8
4,588,755	+		MIT1002_04090	0.19	+2.0
4,588,755	+		MIT1002_04090	0.19	-0.7
4,588,763	-		MIT1002_04090	0.19	-0.7
4,588,763	-		MIT1002_04090	0.19	-1.6
4,588,879	+		MIT1002_04090	0.30	+3.3
4,588,884	+		MIT1002_04090	0.30	+0.6
4,588,887	-		MIT1002_04090	0.31	+1.6
4,588,887	-		MIT1002_04090	0.31	+0.6
4,588,934	+		MIT1002_04090	0.35	+1.5
4,588,934	+		MIT1002_04090	0.35	+0.5
4,588,948	+		MIT1002_04090	0.36	-0.2
4,588,966	-		MIT1002_04090	0.38	-0.1
4,589,076	+		MIT1002_04090	0.48	+0.2
4,589,076	+		MIT1002_04090	0.48	+2.5
4,589,084	-		MIT1002_04090	0.49	+1.8
4,589,138	+		MIT1002_04090	0.54	+0.8
4,589,180	+		MIT1002_04090	0.58	+0.8
4,589,304	+		MIT1002_04090	0.69	-1.0
4,589,540	+				+1.6
4,589,645	+				-0.5
4,589,653	-				+0.3
4,589,674	+				-3.1
4,589,711	+				-1.4
4,589,720	-				+0.9
4,589,766	-		MIT1002_04091	0.10	-2.7
4,589,801	+		MIT1002_04091	0.13	+1.9
4,589,850	-		MIT1002_04091	0.17	-0.0
4,589,852	+		MIT1002_04091	0.17	+0.9
4,589,862	+		MIT1002_04091	0.18	-0.6
4,589,963	+		MIT1002_04091	0.27	-0.5
4,590,017	-		MIT1002_04091	0.32	+1.1
4,590,055	+		MIT1002_04091	0.35	-1.1
4,590,062	-		MIT1002_04091	0.36	-1.5
4,590,062	-		MIT1002_04091	0.36	+1.9
4,590,108	-		MIT1002_04091	0.40	+0.0
4,590,109	-		MIT1002_04091	0.40	+1.4
4,590,115	-		MIT1002_04091	0.40	-2.8
4,590,117	+		MIT1002_04091	0.40	-1.4
4,590,124	+		MIT1002_04091	0.41	+0.9
4,590,125	-		MIT1002_04091	0.41	-2.3
4,590,174	-		MIT1002_04091	0.45	+0.5
4,590,174	-		MIT1002_04091	0.45	-0.7
4,590,193	-		MIT1002_04091	0.47	+1.0
4,590,278	+		MIT1002_04091	0.54	-0.3
4,590,295	+		MIT1002_04091	0.56	+0.7
4,590,344	+		MIT1002_04091	0.60	-0.4
4,590,344	+		MIT1002_04091	0.60	-1.0
4,590,352	-		MIT1002_04091	0.61	-0.3
4,590,354	+		MIT1002_04091	0.61	-0.6
4,590,361	+		MIT1002_04091	0.61	-0.6
4,590,375	-		MIT1002_04091	0.63	+0.7
4,590,375	-		MIT1002_04091	0.63	-2.5
4,590,412	-		MIT1002_04091	0.66	+2.1
4,590,464	+		MIT1002_04091	0.70	+0.6
4,590,542	+		MIT1002_04091	0.77	-0.6
4,590,545	+		MIT1002_04091	0.77	+2.2
4,590,547	+		MIT1002_04091	0.77	+0.8
4,590,550	-		MIT1002_04091	0.78	+2.0
4,590,550	-		MIT1002_04091	0.78	+0.5
4,590,560	-		MIT1002_04091	0.78	+0.3
4,590,560	-		MIT1002_04091	0.78	+0.5
4,590,564	+		MIT1002_04091	0.79	-0.2
4,590,607	+		MIT1002_04091	0.83	+1.3
4,590,975	+		MIT1002_04092	0.11	-3.1
4,591,021	+		MIT1002_04092	0.14	-2.8
4,591,264	+		MIT1002_04092	0.30	-1.5
4,591,272	-		MIT1002_04092	0.31	-3.8
4,591,272	-		MIT1002_04092	0.31	-2.2
4,591,272	-		MIT1002_04092	0.31	-2.8
4,591,300	+		MIT1002_04092	0.32	-4.2
4,591,325	+		MIT1002_04092	0.34	-1.5
4,591,350	+		MIT1002_04092	0.36	-2.1
4,591,358	-		MIT1002_04092	0.36	-3.1
4,591,448	+		MIT1002_04092	0.42	-3.3
4,591,490	-		MIT1002_04092	0.45	-1.0
4,591,534	-		MIT1002_04092	0.48	-2.6
4,591,656	-		MIT1002_04092	0.55	-3.2
4,591,744	+		MIT1002_04092	0.61	-3.4