Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03951

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
4,433,269	+		MIT1002_03949	0.56	-1.6
4,433,286	-		MIT1002_03949	0.59	-0.9
4,433,286	-		MIT1002_03949	0.59	-1.6
4,433,286	-		MIT1002_03949	0.59	-1.3
4,433,432	+		MIT1002_03949	0.82	-0.9
4,433,440	-		MIT1002_03949	0.83	+0.3
4,433,440	-		MIT1002_03949	0.83	+0.3
4,433,457	+		MIT1002_03949	0.86	+0.7
4,433,465	+		MIT1002_03949	0.87	+0.3
4,433,465	+		MIT1002_03949	0.87	+0.0
4,433,465	+		MIT1002_03949	0.87	+1.0
4,433,473	-		MIT1002_03949	0.88	+0.4
4,433,563	-				-1.1
4,433,691	+				+0.5
4,433,793	+				+1.8
4,433,836	-		MIT1002_03950	0.23	+1.0
4,433,838	+		MIT1002_03950	0.24	-2.0
4,433,902	+		MIT1002_03950	0.46	-1.9
4,433,902	+		MIT1002_03950	0.46	-0.3
4,433,910	-		MIT1002_03950	0.48	-0.7
4,434,064	+				-0.1
4,434,094	+				-1.0
4,434,107	-				+0.2
4,434,308	+				-2.9
4,434,310	+		MIT1002_03951	0.10	-0.2
4,434,320	+		MIT1002_03951	0.12	+0.6
4,434,431	+		MIT1002_03951	0.29	-1.2
4,434,454	+		MIT1002_03951	0.33	-1.6
4,434,454	-		MIT1002_03951	0.33	+1.3
4,434,462	+		MIT1002_03951	0.34	+0.1
4,434,479	-		MIT1002_03951	0.37	-0.8
4,434,486	-		MIT1002_03951	0.38	+1.5
4,434,494	-		MIT1002_03951	0.39	+1.6
4,434,562	+		MIT1002_03951	0.50	-1.5
4,434,562	+		MIT1002_03951	0.50	-0.9
4,434,570	-		MIT1002_03951	0.51	+0.6
4,434,584	-		MIT1002_03951	0.53	+1.0
4,434,777	+		MIT1002_03951	0.83	-0.0
4,434,777	-		MIT1002_03951	0.83	+0.5
4,434,806	+		MIT1002_03951	0.88	+0.7
4,434,841	+				-1.1
4,434,922	-				+1.0
4,434,939	-				-1.6
4,435,083	+		MIT1002_03952	0.27	-4.1
4,435,083	+		MIT1002_03952	0.27	-0.9
4,435,083	+		MIT1002_03952	0.27	-0.2
4,435,083	+		MIT1002_03952	0.27	+2.5
4,435,086	-		MIT1002_03952	0.27	-0.5
4,435,091	-		MIT1002_03952	0.28	-0.0
4,435,162	-		MIT1002_03952	0.37	-2.1
4,435,187	+		MIT1002_03952	0.40	-1.7
4,435,197	+		MIT1002_03952	0.42	-0.5
4,435,221	+		MIT1002_03952	0.45	-1.2
4,435,362	+		MIT1002_03952	0.63	+1.0
4,435,387	+		MIT1002_03952	0.67	-1.4
4,435,387	+		MIT1002_03952	0.67	+0.6
4,435,387	+		MIT1002_03952	0.67	+0.1
4,435,395	-		MIT1002_03952	0.68	-0.2
4,435,395	-		MIT1002_03952	0.68	-1.6
4,435,395	-		MIT1002_03952	0.68	+1.2
4,435,429	-		MIT1002_03952	0.72	+0.3
4,435,429	-		MIT1002_03952	0.72	+0.5
4,435,429	-		MIT1002_03952	0.72	+1.6
4,435,431	+		MIT1002_03952	0.72	+1.0
4,435,639	-				-0.7
4,435,723	-				-1.8
4,435,726	+				+1.2
4,435,734	-		MIT1002_03953	0.10	-2.8
4,435,792	+		MIT1002_03953	0.18	-1.0
4,435,792	+		MIT1002_03953	0.18	-0.1
4,435,792	+		MIT1002_03953	0.18	-0.7
4,435,836	-		MIT1002_03953	0.23	-1.2