Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03876

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
4,342,130	+		MIT1002_03875	0.18	-0.5
4,342,130	-		MIT1002_03875	0.18	+0.7
4,342,148	-		MIT1002_03875	0.20	+0.6
4,342,180	+		MIT1002_03875	0.23	-3.0
4,342,183	+		MIT1002_03875	0.23	+0.0
4,342,183	+		MIT1002_03875	0.23	+0.5
4,342,190	+		MIT1002_03875	0.24	-1.9
4,342,191	-		MIT1002_03875	0.24	+0.1
4,342,191	-		MIT1002_03875	0.24	+0.3
4,342,222	-		MIT1002_03875	0.27	+1.3
4,342,222	-		MIT1002_03875	0.27	+0.1
4,342,228	+		MIT1002_03875	0.28	-0.0
4,342,234	-		MIT1002_03875	0.28	-0.7
4,342,246	-		MIT1002_03875	0.29	+0.3
4,342,283	-		MIT1002_03875	0.33	-3.4
4,342,328	-		MIT1002_03875	0.37	-0.2
4,342,332	+		MIT1002_03875	0.38	-2.5
4,342,332	+		MIT1002_03875	0.38	-0.4
4,342,340	-		MIT1002_03875	0.38	+3.8
4,342,359	-		MIT1002_03875	0.40	-0.5
4,342,378	-		MIT1002_03875	0.42	+2.2
4,342,402	+		MIT1002_03875	0.44	+1.0
4,342,403	+		MIT1002_03875	0.44	-1.0
4,342,428	+		MIT1002_03875	0.47	+0.0
4,342,428	+		MIT1002_03875	0.47	-1.2
4,342,428	+		MIT1002_03875	0.47	-3.2
4,342,519	+		MIT1002_03875	0.55	-0.6
4,342,596	+		MIT1002_03875	0.63	-0.4
4,342,601	+		MIT1002_03875	0.63	+2.1
4,342,620	-		MIT1002_03875	0.65	+0.2
4,342,659	+		MIT1002_03875	0.69	-0.0
4,342,675	+		MIT1002_03875	0.70	+0.4
4,342,745	+		MIT1002_03875	0.77	+0.1
4,342,762	+		MIT1002_03875	0.78	-1.2
4,342,780	+		MIT1002_03875	0.80	+0.1
4,342,795	-		MIT1002_03875	0.81	-2.1
4,342,820	-		MIT1002_03875	0.84	+1.3
4,342,824	+		MIT1002_03875	0.84	-0.0
4,342,832	-		MIT1002_03875	0.85	+0.3
4,342,844	+		MIT1002_03875	0.86	-0.2
4,342,844	+		MIT1002_03875	0.86	+0.2
4,342,844	+		MIT1002_03875	0.86	+0.1
4,342,846	+		MIT1002_03875	0.86	+0.4
4,342,852	-		MIT1002_03875	0.87	-1.6
4,342,854	-		MIT1002_03875	0.87	+0.0
4,342,854	-		MIT1002_03875	0.87	-0.4
4,342,913	+				+1.0
4,342,941	-				+0.1
4,342,953	+				+0.2
4,342,958	+				-0.3
4,342,960	-				+0.6
4,343,299	-		MIT1002_03876	0.27	+1.4
4,343,299	-		MIT1002_03876	0.27	+1.3
4,343,411	+		MIT1002_03876	0.44	+0.4
4,343,446	+		MIT1002_03876	0.49	-0.7
4,343,454	-		MIT1002_03876	0.50	-0.3
4,343,454	-		MIT1002_03876	0.50	+0.5
4,343,454	-		MIT1002_03876	0.50	-1.0
4,343,639	+		MIT1002_03876	0.78	+1.0
4,343,723	+				+0.2
4,343,885	+				-1.1
4,343,892	+				+0.5
4,343,900	-				+1.0
4,343,900	-				+0.0
4,343,996	+		MIT1002_03877	0.19	-0.5
4,344,034	+		MIT1002_03877	0.28	+0.2
4,344,049	-		MIT1002_03877	0.32	-0.3
4,344,049	-		MIT1002_03877	0.32	+1.5
4,344,072	-		MIT1002_03877	0.37	-0.8
4,344,130	+		MIT1002_03877	0.51	-0.3
4,344,198	+		MIT1002_03877	0.67	-0.7
4,344,211	+		MIT1002_03877	0.71	+1.0
4,344,254	+		MIT1002_03877	0.81	-1.1
4,344,254	+		MIT1002_03877	0.81	+0.6
4,344,262	-		MIT1002_03877	0.83	+1.4
4,344,262	-		MIT1002_03877	0.83	-2.5
4,344,275	+		MIT1002_03877	0.86	-0.4
4,344,357	-				-0.6
4,344,364	+				+0.6
4,344,403	+				-0.2
4,344,439	+				-0.9
4,344,553	+				-0.3
4,344,623	-		MIT1002_03878	0.15	+1.1
4,344,718	+		MIT1002_03878	0.26	-1.2
4,344,718	+		MIT1002_03878	0.26	+0.7
4,344,727	-		MIT1002_03878	0.27	+1.6
4,344,729	-		MIT1002_03878	0.27	+2.0
4,344,731	-		MIT1002_03878	0.27	+1.3
4,344,742	-		MIT1002_03878	0.28	+1.3