Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03817

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
4,265,197	+				+0.9
4,265,396	+				-0.2
4,265,434	+				+0.6
4,265,493	-				-1.0
4,265,511	+				-0.5
4,265,518	+				-2.4
4,265,526	-				+0.9
4,265,600	+				-0.2
4,265,601	+				+0.4
4,265,608	-				+0.8
4,265,608	-				+2.0
4,265,803	+		MIT1002_03816	0.20	-3.0
4,265,847	-		MIT1002_03816	0.29	-0.4
4,266,015	-		MIT1002_03816	0.66	-0.1
4,266,038	+		MIT1002_03816	0.72	-2.5
4,266,049	-		MIT1002_03816	0.74	-0.7
4,266,060	+		MIT1002_03816	0.76	-0.5
4,266,068	-		MIT1002_03816	0.78	-0.6
4,266,068	-		MIT1002_03816	0.78	-1.3
4,266,068	-		MIT1002_03816	0.78	+2.5
4,266,068	-		MIT1002_03816	0.78	-3.2
4,266,134	-				-1.8
4,266,184	-				+0.1
4,266,978	-				+0.5
4,267,066	+				-1.5
4,267,091	-				+0.5
4,267,095	-				-0.4
4,267,097	+				-0.3
4,267,105	-				+0.6
4,267,105	-				-2.0
4,267,105	-				+0.8
4,267,105	-				+0.8
4,267,117	-		MIT1002_03819	0.13	-1.1
4,267,183	+		MIT1002_03819	0.36	+0.9
4,267,197	-		MIT1002_03819	0.41	+0.9
4,267,199	+		MIT1002_03819	0.41	-2.0
4,267,252	+		MIT1002_03819	0.60	-0.0
4,267,252	+		MIT1002_03819	0.60	-0.2
4,267,260	-		MIT1002_03819	0.62	+0.1
4,267,333	+		MIT1002_03819	0.88	-1.6
4,267,341	-				-0.6
4,267,364	-				+0.1
4,267,386	+				+0.3