Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03753

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
4,193,698	-		MIT1002_03752	0.13	+0.9
4,193,700	+		MIT1002_03752	0.13	+0.2
4,193,847	-		MIT1002_03752	0.28	+0.1
4,193,900	+		MIT1002_03752	0.34	+0.2
4,193,915	+		MIT1002_03752	0.36	-0.2
4,193,926	+		MIT1002_03752	0.37	-0.2
4,193,926	+		MIT1002_03752	0.37	+0.2
4,193,934	-		MIT1002_03752	0.38	-0.1
4,194,015	-		MIT1002_03752	0.46	+0.3
4,194,079	+		MIT1002_03752	0.53	-0.5
4,194,138	-		MIT1002_03752	0.59	+1.2
4,194,142	+		MIT1002_03752	0.59	+1.4
4,194,142	+		MIT1002_03752	0.59	+0.6
4,194,142	+		MIT1002_03752	0.59	+0.9
4,194,150	-		MIT1002_03752	0.60	-1.2
4,194,197	-		MIT1002_03752	0.65	+0.0
4,194,237	+		MIT1002_03752	0.69	+0.7
4,194,253	+		MIT1002_03752	0.71	-0.1
4,194,253	+		MIT1002_03752	0.71	+0.6
4,194,258	+		MIT1002_03752	0.72	-0.5
4,194,269	+		MIT1002_03752	0.73	-2.5
4,194,352	+		MIT1002_03752	0.81	-0.3
4,194,371	+		MIT1002_03752	0.83	-0.2
4,194,374	-		MIT1002_03752	0.84	-0.0
4,194,416	-		MIT1002_03752	0.88	-0.1
4,194,452	+				-0.3
4,194,484	+				+0.4
4,194,494	+				-1.6
4,194,502	-				+0.1
4,194,511	+				-1.0
4,194,610	+		MIT1002_03753	0.15	-0.2
4,194,623	+		MIT1002_03753	0.19	+1.3
4,194,628	-		MIT1002_03753	0.20	-1.3
4,194,631	-		MIT1002_03753	0.21	-0.6
4,194,631	-		MIT1002_03753	0.21	-2.0
4,194,761	+		MIT1002_03753	0.55	-0.8
4,194,768	+		MIT1002_03753	0.57	-1.7
4,194,776	-		MIT1002_03753	0.59	-1.4
4,194,835	+		MIT1002_03753	0.74	-0.3
4,194,858	+		MIT1002_03753	0.80	-0.4
4,194,914	-				+1.3
4,194,978	-				-1.1
4,195,120	+		MIT1002_03754	0.13	+1.9
4,195,161	-		MIT1002_03754	0.18	+0.5
4,195,186	-		MIT1002_03754	0.21	-0.7
4,195,191	-		MIT1002_03754	0.22	+0.2
4,195,307	+		MIT1002_03754	0.36	+0.8
4,195,361	+		MIT1002_03754	0.42	+1.0
4,195,392	+		MIT1002_03754	0.46	-3.4
4,195,423	+		MIT1002_03754	0.50	+0.2
4,195,438	+		MIT1002_03754	0.52	-0.3
4,195,519	-		MIT1002_03754	0.62	-0.2
4,195,519	-		MIT1002_03754	0.62	-0.8
4,195,528	-		MIT1002_03754	0.63	+0.3
4,195,538	+		MIT1002_03754	0.64	+0.2
4,195,580	-		MIT1002_03754	0.69	-0.1
4,195,767	+				+1.5
4,195,767	+				+0.3
4,195,767	+				+0.6
4,195,767	+				-0.2
4,195,767	+				-3.0
4,195,767	+				-1.4
4,195,767	+				+0.0
4,195,775	-				-1.5
4,195,775	-				+1.0
4,195,775	-				+1.8
4,195,775	-				-1.1
4,195,785	-				-1.6
4,195,825	+				-0.5