Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03522

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,937,841	+		MIT1002_03521	0.64	+2.0
3,937,847	+		MIT1002_03521	0.64	+0.9
3,937,870	+		MIT1002_03521	0.65	+0.6
3,937,878	-		MIT1002_03521	0.65	+0.8
3,937,878	-		MIT1002_03521	0.65	+1.0
3,937,897	+		MIT1002_03521	0.66	-0.4
3,937,905	-		MIT1002_03521	0.66	+0.3
3,937,905	-		MIT1002_03521	0.66	+0.8
3,937,934	+		MIT1002_03521	0.68	-1.0
3,938,015	-		MIT1002_03521	0.71	+0.0
3,938,075	+		MIT1002_03521	0.73	-2.0
3,938,075	+		MIT1002_03521	0.73	+2.1
3,938,090	-		MIT1002_03521	0.74	+0.5
3,938,099	+		MIT1002_03521	0.74	+1.2
3,938,131	+		MIT1002_03521	0.75	+0.7
3,938,159	+		MIT1002_03521	0.77	+0.7
3,938,163	+		MIT1002_03521	0.77	+0.7
3,938,202	+		MIT1002_03521	0.78	+0.3
3,938,233	-		MIT1002_03521	0.80	-1.6
3,938,245	+		MIT1002_03521	0.80	-0.2
3,938,246	-		MIT1002_03521	0.80	-0.1
3,938,324	+		MIT1002_03521	0.83	+0.4
3,938,332	-		MIT1002_03521	0.84	+0.2
3,938,351	+		MIT1002_03521	0.84	-2.0
3,938,359	-		MIT1002_03521	0.85	+0.4
3,938,365	+		MIT1002_03521	0.85	+0.2
3,938,365	+		MIT1002_03521	0.85	+1.4
3,938,365	+		MIT1002_03521	0.85	-2.5
3,938,365	+		MIT1002_03521	0.85	+0.1
3,938,373	-		MIT1002_03521	0.85	+0.2
3,938,373	-		MIT1002_03521	0.85	-3.2
3,938,373	-		MIT1002_03521	0.85	-1.3
3,938,373	-		MIT1002_03521	0.85	-0.2
3,938,373	-		MIT1002_03521	0.85	+0.7
3,938,373	-		MIT1002_03521	0.85	-0.4
3,938,380	+		MIT1002_03521	0.86	+0.3
3,938,392	+		MIT1002_03521	0.86	+0.6
3,938,392	+		MIT1002_03521	0.86	-0.1
3,938,395	-		MIT1002_03521	0.86	-2.0
3,938,400	-		MIT1002_03521	0.86	-0.0
3,938,437	+		MIT1002_03521	0.88	+0.3
3,938,476	+		MIT1002_03521	0.89	-0.1
3,938,476	+		MIT1002_03521	0.89	+0.9
3,938,484	-		MIT1002_03521	0.90	+1.7
3,938,507	+				+0.9
3,938,507	+				-1.4
3,938,515	-				+0.3
3,938,515	-				-0.9
3,938,515	-				+0.6
3,938,543	-				+1.3
3,938,609	+				+0.6
3,938,676	+				+1.6
3,938,684	-				+1.0
3,938,684	-				+1.8
3,938,690	+				+0.9
3,938,700	+				+0.5
3,938,700	+				-0.0
3,938,700	+				+1.7
3,938,724	-				+1.2
3,938,820	+				+1.1
3,938,822	+				+0.5
3,938,860	+				+1.3
3,938,873	+				-2.2
3,938,906	+				+1.8
3,938,950	-		MIT1002_03522	0.14	+0.4
3,938,962	+		MIT1002_03522	0.15	+0.5
3,938,995	+		MIT1002_03522	0.19	+1.3
3,939,021	+		MIT1002_03522	0.22	-0.3
3,939,021	+		MIT1002_03522	0.22	-0.4
3,939,029	-		MIT1002_03522	0.23	+1.1
3,939,042	+		MIT1002_03522	0.25	+0.1
3,939,085	-		MIT1002_03522	0.30	+0.6
3,939,107	+		MIT1002_03522	0.33	+0.7
3,939,108	-		MIT1002_03522	0.33	+0.8
3,939,120	-		MIT1002_03522	0.34	+1.2
3,939,291	+		MIT1002_03522	0.54	-0.2
3,939,330	-		MIT1002_03522	0.59	-0.4
3,939,330	-		MIT1002_03522	0.59	+0.6
3,939,451	+		MIT1002_03522	0.73	+0.1
3,939,459	-		MIT1002_03522	0.74	+0.4
3,939,461	+		MIT1002_03522	0.74	+0.7
3,939,461	+		MIT1002_03522	0.74	-0.2
3,939,461	+		MIT1002_03522	0.74	+0.7
3,939,461	+		MIT1002_03522	0.74	+1.0
3,939,461	+		MIT1002_03522	0.74	-0.3
3,939,461	+		MIT1002_03522	0.74	+0.1
3,939,469	-		MIT1002_03522	0.75	-0.6
3,939,469	-		MIT1002_03522	0.75	-1.1
3,939,469	-		MIT1002_03522	0.75	+0.0
3,939,469	-		MIT1002_03522	0.75	+0.5
3,939,469	-		MIT1002_03522	0.75	+1.6
3,939,469	-		MIT1002_03522	0.75	+1.8
3,939,469	-		MIT1002_03522	0.75	+0.8
3,939,469	-		MIT1002_03522	0.75	-1.4
3,939,469	-		MIT1002_03522	0.75	+0.8
3,939,469	-		MIT1002_03522	0.75	+0.2
3,939,469	-		MIT1002_03522	0.75	-2.7
3,939,469	-		MIT1002_03522	0.75	-0.7
3,939,469	-		MIT1002_03522	0.75	+1.0
3,939,469	-		MIT1002_03522	0.75	+0.3
3,939,530	+		MIT1002_03522	0.83	+0.4
3,939,530	+		MIT1002_03522	0.83	-0.4
3,939,535	+		MIT1002_03522	0.83	+0.1
3,939,538	-		MIT1002_03522	0.84	+1.0
3,939,538	-		MIT1002_03522	0.84	+0.0
3,939,538	-		MIT1002_03522	0.84	+0.3
3,939,540	+		MIT1002_03522	0.84	+0.5
3,939,548	-		MIT1002_03522	0.85	+0.7
3,939,600	+				+0.4
3,939,600	-				+0.9
3,939,681	+				+0.4
3,939,683	+				-1.0
3,939,702	+				+0.3
3,939,982	-		MIT1002_03523	0.17	+0.5
3,940,035	+		MIT1002_03523	0.24	+1.6
3,940,043	-		MIT1002_03523	0.25	+3.7
3,940,045	+		MIT1002_03523	0.25	+0.9
3,940,051	-		MIT1002_03523	0.26	+1.1
3,940,051	-		MIT1002_03523	0.26	+0.7
3,940,051	-		MIT1002_03523	0.26	-0.8
3,940,105	+		MIT1002_03523	0.32	-1.9
3,940,110	+		MIT1002_03523	0.33	-0.3
3,940,110	+		MIT1002_03523	0.33	+0.2
3,940,110	+		MIT1002_03523	0.33	+2.0
3,940,113	-		MIT1002_03523	0.33	+0.8
3,940,118	-		MIT1002_03523	0.34	-1.2
3,940,118	-		MIT1002_03523	0.34	+0.3
3,940,118	-		MIT1002_03523	0.34	+0.2
3,940,174	-		MIT1002_03523	0.40	-0.2
3,940,187	-		MIT1002_03523	0.42	-0.9
3,940,209	-		MIT1002_03523	0.44	-0.7
3,940,233	+		MIT1002_03523	0.47	+1.2
3,940,233	+		MIT1002_03523	0.47	+1.1
3,940,330	+		MIT1002_03523	0.59	+1.6
3,940,408	+		MIT1002_03523	0.68	-2.7
3,940,408	+		MIT1002_03523	0.68	-1.2
3,940,416	-		MIT1002_03523	0.69	+1.2
3,940,439	-		MIT1002_03523	0.72	+0.9
3,940,465	+		MIT1002_03523	0.75	+1.5
3,940,511	-		MIT1002_03523	0.80	+1.6
3,940,644	+				-0.1
3,940,652	-				-0.4