Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03519

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,932,738	-		MIT1002_03518	0.28	+1.5
3,932,758	-		MIT1002_03518	0.30	+0.4
3,932,767	+		MIT1002_03518	0.31	+0.8
3,932,798	+		MIT1002_03518	0.34	+1.0
3,932,803	+		MIT1002_03518	0.34	+0.5
3,932,803	+		MIT1002_03518	0.34	+0.7
3,932,811	+		MIT1002_03518	0.35	-0.3
3,932,811	-		MIT1002_03518	0.35	+0.8
3,932,811	-		MIT1002_03518	0.35	-1.6
3,932,853	-		MIT1002_03518	0.38	+0.2
3,932,861	+		MIT1002_03518	0.39	-0.3
3,932,861	+		MIT1002_03518	0.39	-0.1
3,932,869	-		MIT1002_03518	0.40	+0.2
3,932,987	-		MIT1002_03518	0.50	-0.3
3,933,033	+		MIT1002_03518	0.54	+0.2
3,933,039	+		MIT1002_03518	0.55	-0.0
3,933,047	-		MIT1002_03518	0.55	-0.9
3,933,049	+		MIT1002_03518	0.55	-0.2
3,933,049	+		MIT1002_03518	0.55	+0.9
3,933,057	-		MIT1002_03518	0.56	+0.3
3,933,076	+		MIT1002_03518	0.58	+1.2
3,933,213	+		MIT1002_03518	0.70	+1.5
3,933,214	+		MIT1002_03518	0.70	+0.9
3,933,216	-		MIT1002_03518	0.70	-3.2
3,933,224	+		MIT1002_03518	0.71	-3.1
3,933,232	-		MIT1002_03518	0.71	-2.8
3,933,238	-		MIT1002_03518	0.72	-0.7
3,933,255	-		MIT1002_03518	0.73	+0.6
3,933,274	+		MIT1002_03518	0.75	+0.5
3,933,341	+		MIT1002_03518	0.81	+0.2
3,933,346	+		MIT1002_03518	0.81	-0.3
3,933,349	-		MIT1002_03518	0.81	+0.8
3,933,351	+		MIT1002_03518	0.82	+1.0
3,933,354	-		MIT1002_03518	0.82	-0.4
3,933,450	+				-1.4
3,933,531	+				+1.3
3,933,539	-				+0.3
3,933,547	+				+0.1
3,933,631	+				-0.5
3,933,636	+				+0.4
3,933,644	-				+0.6
3,933,688	-				+1.0
3,933,694	+				-1.5
3,933,703	-				+0.5
3,933,703	-				+1.1
3,933,703	-				-0.2
3,933,723	-				+0.2
3,933,723	-				+0.2
3,933,827	-		MIT1002_03519	0.15	-0.4
3,933,849	+		MIT1002_03519	0.17	+0.6
3,933,881	+		MIT1002_03519	0.20	-1.6
3,933,888	+		MIT1002_03519	0.20	-0.7
3,933,945	-		MIT1002_03519	0.26	+0.8
3,933,945	-		MIT1002_03519	0.26	-2.1
3,933,950	+		MIT1002_03519	0.26	-2.1
3,933,969	+		MIT1002_03519	0.28	+0.7
3,934,032	-		MIT1002_03519	0.34	+0.4
3,934,119	+		MIT1002_03519	0.42	-2.1
3,934,127	-		MIT1002_03519	0.43	-0.8
3,934,132	-		MIT1002_03519	0.43	-0.3
3,934,141	+		MIT1002_03519	0.44	+0.4
3,934,149	-		MIT1002_03519	0.45	+1.0
3,934,160	+		MIT1002_03519	0.46	-0.5
3,934,168	-		MIT1002_03519	0.47	-0.1
3,934,226	+		MIT1002_03519	0.52	-3.3
3,934,282	+		MIT1002_03519	0.58	-0.1
3,934,282	+		MIT1002_03519	0.58	-0.6
3,934,282	+		MIT1002_03519	0.58	+0.6
3,934,290	-		MIT1002_03519	0.58	-1.3
3,934,290	-		MIT1002_03519	0.58	+2.1
3,934,318	+		MIT1002_03519	0.61	-0.4
3,934,326	-		MIT1002_03519	0.62	-0.7
3,934,416	+		MIT1002_03519	0.70	-0.5
3,934,599	+		MIT1002_03519	0.88	+0.3
3,934,599	+		MIT1002_03519	0.88	-1.0
3,934,599	+		MIT1002_03519	0.88	-0.7
3,934,607	-		MIT1002_03519	0.89	+0.8
3,934,607	-		MIT1002_03519	0.89	-0.2
3,934,607	-		MIT1002_03519	0.89	-1.0
3,934,607	-		MIT1002_03519	0.89	+1.1
3,934,607	-		MIT1002_03519	0.89	-0.3
3,934,607	-		MIT1002_03519	0.89	-0.8
3,934,607	-		MIT1002_03519	0.89	-0.8
3,934,607	-		MIT1002_03519	0.89	-0.1
3,934,609	+		MIT1002_03519	0.89	-1.7
3,934,656	+				+1.1
3,934,656	+				-0.3
3,934,656	+				-0.2
3,934,656	+				+0.1
3,934,656	+				+0.9
3,934,689	-				-1.4
3,934,745	-				+0.0
3,934,747	+				+1.5
3,934,747	+				+1.4
3,934,747	+				+0.7
3,934,747	+				-1.2
3,934,747	+				-0.7
3,934,747	+				+0.7
3,934,755	-				+1.7
3,934,755	-				+0.5
3,934,755	-				+1.1
3,934,815	+				-3.0
3,934,827	+				-0.7
3,934,919	+		MIT1002_03520	0.10	-0.4
3,934,960	+		MIT1002_03520	0.14	-0.7
3,935,045	+		MIT1002_03520	0.22	-3.5
3,935,055	-		MIT1002_03520	0.23	-0.5
3,935,066	+		MIT1002_03520	0.24	-1.4
3,935,099	-		MIT1002_03520	0.27	+1.3
3,935,124	+		MIT1002_03520	0.30	-0.6
3,935,133	-		MIT1002_03520	0.31	-0.7
3,935,134	+		MIT1002_03520	0.31	-2.7
3,935,134	+		MIT1002_03520	0.31	-0.3
3,935,134	+		MIT1002_03520	0.31	-0.0
3,935,134	+		MIT1002_03520	0.31	-2.9
3,935,136	+		MIT1002_03520	0.31	+0.4
3,935,142	-		MIT1002_03520	0.31	-1.2
3,935,142	-		MIT1002_03520	0.31	-0.1
3,935,142	-		MIT1002_03520	0.31	-2.3
3,935,142	-		MIT1002_03520	0.31	-0.1
3,935,142	-		MIT1002_03520	0.31	-0.6
3,935,142	-		MIT1002_03520	0.31	-0.6
3,935,142	-		MIT1002_03520	0.31	-0.7
3,935,299	+		MIT1002_03520	0.46	+0.9
3,935,299	+		MIT1002_03520	0.46	-2.1
3,935,383	-		MIT1002_03520	0.54	-3.3
3,935,393	-		MIT1002_03520	0.55	-1.4
3,935,462	+		MIT1002_03520	0.62	+0.8
3,935,506	+		MIT1002_03520	0.66	+0.8
3,935,507	+		MIT1002_03520	0.66	-0.3
3,935,541	+		MIT1002_03520	0.69	+1.2
3,935,600	+		MIT1002_03520	0.75	+0.5
3,935,725	+		MIT1002_03520	0.86	+0.2
3,935,725	+		MIT1002_03520	0.86	-1.4