Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03412

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,813,442	+				-0.5
3,813,442	+				-0.7
3,813,450	-				-0.2
3,813,575	-		MIT1002_03411	0.28	-0.8
3,813,667	-		MIT1002_03411	0.63	+0.7
3,813,670	-		MIT1002_03411	0.64	-0.1
3,813,727	-		MIT1002_03411	0.86	-0.3
3,813,744	-				-0.1
3,813,796	-				-0.1
3,813,909	+				+0.8
3,814,046	-				-0.7
3,814,056	+				-4.1
3,814,057	+				+0.6
3,814,083	-				-1.6
3,814,109	+				-0.8
3,814,110	-				+1.1
3,814,112	-				+2.9
3,814,195	+				+1.1
3,814,277	+				-2.8
3,814,330	+				+1.7
3,814,372	+				+0.5
3,814,387	-				+1.7
3,814,404	-				+1.5
3,814,451	+				+0.5
3,814,480	+		MIT1002_03412	0.11	+0.2
3,814,536	+		MIT1002_03412	0.21	+1.3
3,814,556	-		MIT1002_03412	0.24	-1.5
3,814,556	-		MIT1002_03412	0.24	-1.9
3,814,556	-		MIT1002_03412	0.24	-0.2
3,814,562	+		MIT1002_03412	0.26	-0.7
3,814,562	+		MIT1002_03412	0.26	-0.8
3,814,569	+		MIT1002_03412	0.27	-4.0
3,814,570	-		MIT1002_03412	0.27	-0.7
3,814,590	+		MIT1002_03412	0.31	-0.9
3,814,598	-		MIT1002_03412	0.32	-1.4
3,814,673	+		MIT1002_03412	0.46	-0.9
3,814,683	+		MIT1002_03412	0.47	-1.7
3,814,718	+		MIT1002_03412	0.54	-0.9
3,815,015	+				-0.1
3,815,041	+				-0.5
3,815,041	-				+0.4
3,815,049	-				-0.9
3,815,053	+				-1.6
3,815,199	+		MIT1002_03413	0.13	+0.2
3,815,209	-		MIT1002_03413	0.13	-0.1
3,815,241	-		MIT1002_03413	0.15	+0.7
3,815,242	-		MIT1002_03413	0.15	+0.3
3,815,263	-		MIT1002_03413	0.16	-1.7
3,815,274	-		MIT1002_03413	0.17	-0.6
3,815,352	-		MIT1002_03413	0.21	+0.1
3,815,360	+		MIT1002_03413	0.22	-3.9
3,815,368	+		MIT1002_03413	0.22	+1.2
3,815,368	+		MIT1002_03413	0.22	-2.3
3,815,368	-		MIT1002_03413	0.22	-0.1
3,815,390	-		MIT1002_03413	0.23	+0.3
3,815,561	-		MIT1002_03413	0.33	-0.0
3,815,561	-		MIT1002_03413	0.33	-0.6
3,815,563	+		MIT1002_03413	0.33	+0.0
3,815,610	+		MIT1002_03413	0.36	-3.1
3,815,618	-		MIT1002_03413	0.36	-0.1
3,815,670	+		MIT1002_03413	0.39	-1.3
3,815,675	-		MIT1002_03413	0.40	-0.7
3,815,738	-		MIT1002_03413	0.43	+0.1
3,815,756	-		MIT1002_03413	0.44	-1.2
3,815,792	+		MIT1002_03413	0.46	+0.2
3,815,901	+		MIT1002_03413	0.52	+1.2