Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03410

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,811,600	+				-0.1
3,811,608	-				-2.6
3,811,797	-		MIT1002_03407	0.15	-1.4
3,811,799	+		MIT1002_03407	0.16	+1.2
3,811,799	+		MIT1002_03407	0.16	-0.9
3,811,807	-		MIT1002_03407	0.20	+0.1
3,811,807	-		MIT1002_03407	0.20	+0.2
3,811,834	+		MIT1002_03407	0.31	+0.3
3,811,849	+		MIT1002_03407	0.38	-1.2
3,811,863	-		MIT1002_03407	0.44	-0.2
3,811,892	+		MIT1002_03407	0.56	+1.3
3,811,930	+		MIT1002_03407	0.72	-0.4
3,811,933	-		MIT1002_03407	0.74	-0.2
3,811,954	+		MIT1002_03407	0.82	-2.3
3,811,962	-		MIT1002_03407	0.86	-0.4
3,811,975	-				-0.8
3,812,155	+		MIT1002_03408	0.68	+0.5
3,812,262	+		MIT1002_03409	0.12	+0.2
3,812,303	+		MIT1002_03409	0.27	+0.4
3,812,316	+		MIT1002_03409	0.32	+1.0
3,812,333	-		MIT1002_03409	0.38	+1.2
3,812,359	+		MIT1002_03409	0.47	+0.0
3,812,383	+		MIT1002_03409	0.56	-0.3
3,812,391	-		MIT1002_03409	0.59	-2.7
3,812,416	+		MIT1002_03409	0.68	+1.5
3,812,434	-		MIT1002_03409	0.74	+0.5
3,812,477	+				+0.4
3,812,484	-				+1.9
3,812,547	+				-0.5
3,812,560	-				-0.2
3,812,589	-				-0.4
3,812,624	-				-0.4
3,812,630	-				-0.8
3,812,645	+		MIT1002_03410	0.11	-0.2
3,812,653	-		MIT1002_03410	0.12	-1.0
3,812,667	+		MIT1002_03410	0.14	-1.2
3,812,680	-		MIT1002_03410	0.16	-1.8
3,812,686	+		MIT1002_03410	0.16	-2.8
3,812,831	-		MIT1002_03410	0.37	-0.1
3,812,832	+		MIT1002_03410	0.37	-0.0
3,812,907	-		MIT1002_03410	0.47	+1.1
3,812,907	-		MIT1002_03410	0.47	+0.6
3,812,947	+		MIT1002_03410	0.53	-0.1
3,813,039	-		MIT1002_03410	0.66	-1.0
3,813,056	-		MIT1002_03410	0.68	-0.2
3,813,069	+		MIT1002_03410	0.70	-0.8
3,813,081	+		MIT1002_03410	0.72	-0.3
3,813,081	+		MIT1002_03410	0.72	+0.2
3,813,089	-		MIT1002_03410	0.73	+0.4
3,813,114	+		MIT1002_03410	0.76	+1.5
3,813,142	-		MIT1002_03410	0.80	+0.1
3,813,157	+		MIT1002_03410	0.82	-0.8
3,813,161	+		MIT1002_03410	0.83	+0.4
3,813,177	+		MIT1002_03410	0.85	-1.9
3,813,180	+		MIT1002_03410	0.85	-0.5
3,813,180	+		MIT1002_03410	0.85	-2.2
3,813,187	-		MIT1002_03410	0.86	+0.9
3,813,188	-		MIT1002_03410	0.86	+0.8
3,813,188	-		MIT1002_03410	0.86	-1.0
3,813,194	-		MIT1002_03410	0.87	-0.4
3,813,198	+		MIT1002_03410	0.88	-0.4
3,813,199	-		MIT1002_03410	0.88	-0.3
3,813,249	+				+1.6
3,813,249	+				+0.1
3,813,257	-				+0.8
3,813,257	-				+0.2
3,813,257	-				+1.4
3,813,267	-				-0.6
3,813,400	+				-0.8
3,813,402	+				+1.9
3,813,413	-				+0.4
3,813,413	-				+0.1
3,813,442	+				-0.5
3,813,442	+				-0.7
3,813,450	-				-0.2
3,813,575	-		MIT1002_03411	0.28	-0.8
3,813,667	-		MIT1002_03411	0.63	+0.7
3,813,670	-		MIT1002_03411	0.64	-0.1
3,813,727	-		MIT1002_03411	0.86	-0.3
3,813,744	-				-0.1
3,813,796	-				-0.1
3,813,909	+				+0.8
3,814,046	-				-0.7
3,814,056	+				-4.1
3,814,057	+				+0.6
3,814,083	-				-1.6
3,814,109	+				-0.8
3,814,110	-				+1.1
3,814,112	-				+2.9
3,814,195	+				+1.1
3,814,277	+				-2.8