Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03386

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,787,069	-				-0.5
3,787,118	-		MIT1002_03385	0.17	-0.0
3,787,166	-		MIT1002_03385	0.24	-0.7
3,787,166	-		MIT1002_03385	0.24	+0.2
3,787,285	+		MIT1002_03385	0.42	-3.6
3,787,297	+		MIT1002_03385	0.43	-0.1
3,787,305	-		MIT1002_03385	0.45	+1.1
3,787,310	+		MIT1002_03385	0.45	+0.9
3,787,417	-		MIT1002_03385	0.61	+1.6
3,787,473	-		MIT1002_03385	0.70	-3.9
3,787,490	+		MIT1002_03385	0.72	+0.6
3,787,492	+		MIT1002_03385	0.73	-0.3
3,787,498	-		MIT1002_03385	0.74	+0.0
3,787,508	-		MIT1002_03385	0.75	-0.8
3,787,518	+		MIT1002_03385	0.77	+1.6
3,787,535	+		MIT1002_03385	0.79	+0.3
3,787,633	-				+0.5
3,787,731	-				+0.4
3,787,740	+				-0.2
3,787,754	+				+0.4
3,787,761	+				-0.7
3,787,761	+				-0.5
3,787,938	+				+2.1
3,787,950	+				-2.5
3,787,958	-				+1.6
3,788,108	+		MIT1002_03386	0.35	+0.6
3,788,137	+		MIT1002_03386	0.45	+0.6
3,788,145	-		MIT1002_03386	0.48	+0.2
3,788,178	-		MIT1002_03386	0.59	+0.8
3,788,317	+				+1.0
3,788,325	-				-0.6
3,788,343	+				+0.1
3,788,351	-				-3.2
3,788,351	-				+0.2
3,788,351	-				-3.1
3,788,502	+				-0.4
3,788,510	-				-2.2
3,788,822	+		MIT1002_03387	0.34	+1.6
3,788,882	+		MIT1002_03387	0.41	+0.2
3,788,889	-		MIT1002_03387	0.41	+0.7
3,788,895	+		MIT1002_03387	0.42	+0.4
3,788,923	+		MIT1002_03387	0.45	+0.7
3,788,923	-		MIT1002_03387	0.45	+0.5
3,788,972	+		MIT1002_03387	0.50	-1.2
3,789,054	+		MIT1002_03387	0.58	-0.8
3,789,060	+		MIT1002_03387	0.59	+0.6
3,789,166	-		MIT1002_03387	0.70	+0.9
3,789,180	-		MIT1002_03387	0.71	+0.6
3,789,239	+		MIT1002_03387	0.77	+0.9
3,789,263	+		MIT1002_03387	0.80	-1.2
3,789,264	-		MIT1002_03387	0.80	+2.0
3,789,268	+		MIT1002_03387	0.80	-1.8
3,789,271	-		MIT1002_03387	0.80	-0.3
3,789,279	-		MIT1002_03387	0.81	+1.4
3,789,279	-		MIT1002_03387	0.81	-0.4