Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03377

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,778,125	+		MIT1002_03376	0.63	+2.1
3,778,125	+		MIT1002_03376	0.63	+1.1
3,778,125	+		MIT1002_03376	0.63	-0.8
3,778,143	-		MIT1002_03376	0.64	+0.6
3,778,143	-		MIT1002_03376	0.64	-1.1
3,778,174	-		MIT1002_03376	0.65	-1.4
3,778,322	-		MIT1002_03376	0.72	-0.6
3,778,322	-		MIT1002_03376	0.72	-1.8
3,778,322	-		MIT1002_03376	0.72	+1.0
3,778,350	+		MIT1002_03376	0.73	+0.9
3,778,358	-		MIT1002_03376	0.73	-0.5
3,778,367	-		MIT1002_03376	0.74	+1.7
3,778,547	-		MIT1002_03376	0.82	+0.3
3,778,794	+				+0.0
3,778,795	+				+0.8
3,778,795	+				-0.0
3,778,830	-				-1.5
3,778,857	+				+0.8
3,778,896	+				-0.3
3,778,965	-				-0.7
3,779,035	-				-2.6
3,779,045	-				+0.1
3,779,104	+				+0.6
3,779,146	+				-3.1
3,779,156	+				-1.1
3,779,163	+				-0.3
3,779,164	-				+0.9
3,779,171	-				-3.2
3,779,171	-				+1.5
3,779,259	+		MIT1002_03377	0.18	-0.3
3,779,259	+		MIT1002_03377	0.18	-0.6
3,779,261	+		MIT1002_03377	0.19	+0.6
3,779,270	+		MIT1002_03377	0.20	-0.1
3,779,278	-		MIT1002_03377	0.20	-0.8
3,779,355	+		MIT1002_03377	0.29	-2.0
3,779,365	+		MIT1002_03377	0.30	-0.3
3,779,373	-		MIT1002_03377	0.31	+0.8
3,779,423	-		MIT1002_03377	0.36	+1.5
3,779,581	-		MIT1002_03377	0.54	+0.5
3,779,699	-		MIT1002_03377	0.67	+2.1
3,779,730	+		MIT1002_03377	0.70	-0.8
3,779,733	-		MIT1002_03377	0.71	+0.1
3,779,733	-		MIT1002_03377	0.71	-1.9
3,779,738	-		MIT1002_03377	0.71	-2.4
3,779,738	-		MIT1002_03377	0.71	-0.2
3,779,740	+		MIT1002_03377	0.71	+1.7
3,779,740	+		MIT1002_03377	0.71	-0.5
3,779,740	+		MIT1002_03377	0.71	-1.1
3,779,740	+		MIT1002_03377	0.71	+0.1
3,779,748	-		MIT1002_03377	0.72	+1.2
3,779,800	-		MIT1002_03377	0.78	-2.1
3,779,800	-		MIT1002_03377	0.78	+0.9
3,779,802	-		MIT1002_03377	0.78	+0.9
3,779,810	-		MIT1002_03377	0.79	+0.2
3,779,827	-		MIT1002_03377	0.81	-0.4
3,779,873	+		MIT1002_03377	0.86	-0.6
3,779,914	-				-0.2
3,779,916	+				-0.1
3,779,924	-				+0.8
3,779,924	-				-0.3
3,779,950	+				+0.8
3,779,960	+				+0.6
3,780,002	-				-1.6
3,780,768	-				-2.4