Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03368

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,768,392	+				-0.0
3,768,636	+				-4.1
3,768,644	-				+0.6
3,768,699	+				+0.8
3,768,707	-				+0.2
3,768,709	+				+0.9
3,768,719	-				-3.0
3,768,801	+		MIT1002_03368	0.12	+0.1
3,768,859	-		MIT1002_03368	0.24	-3.3
3,768,877	-		MIT1002_03368	0.28	-0.9
3,768,881	+		MIT1002_03368	0.29	-0.2
3,768,919	-		MIT1002_03368	0.37	-0.7
3,768,947	-		MIT1002_03368	0.43	+0.4
3,768,964	+		MIT1002_03368	0.47	-2.4
3,768,972	-		MIT1002_03368	0.48	+0.1
3,769,016	-		MIT1002_03368	0.58	-1.7
3,769,168	+				-0.4
3,769,168	+				+0.3
3,769,176	-				+0.1
3,769,190	+				-0.4
3,769,190	+				+0.1
3,769,193	-				+0.1
3,769,198	-				-2.1
3,769,198	-				-0.8
3,769,234	+				+0.6
3,769,310	+				-1.7
3,769,357	+				-0.4
3,769,391	+				-0.2
3,769,419	-				-0.4
3,769,426	+		MIT1002_03369	0.10	+2.3
3,769,432	-		MIT1002_03369	0.11	-0.3
3,769,432	-		MIT1002_03369	0.11	-2.0
3,769,558	-		MIT1002_03369	0.20	+0.6
3,769,593	+		MIT1002_03369	0.23	-0.1
3,769,596	-		MIT1002_03369	0.23	-0.4
3,769,598	+		MIT1002_03369	0.23	-0.6
3,769,623	-		MIT1002_03369	0.25	+0.3
3,769,625	+		MIT1002_03369	0.25	+0.7
3,769,779	+		MIT1002_03369	0.37	-0.4
3,769,787	-		MIT1002_03369	0.38	-0.3
3,769,787	-		MIT1002_03369	0.38	+0.2
3,769,825	+		MIT1002_03369	0.41	+0.9
3,769,865	-		MIT1002_03369	0.44	-2.8
3,769,865	-		MIT1002_03369	0.44	-0.5
3,769,917	+		MIT1002_03369	0.48	-0.8
3,769,951	-		MIT1002_03369	0.50	+0.7
3,770,031	+		MIT1002_03369	0.56	-0.2
3,770,182	+		MIT1002_03369	0.68	+0.8
3,770,182	+		MIT1002_03369	0.68	+0.2
3,770,190	-		MIT1002_03369	0.68	-1.0
3,770,190	-		MIT1002_03369	0.68	-0.4
3,770,190	-		MIT1002_03369	0.68	-1.2
3,770,190	-		MIT1002_03369	0.68	+3.1