Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03318

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,701,609	-				+0.1
3,701,614	-				+0.2
3,701,614	-				+0.4
3,701,657	+				-1.0
3,701,690	+				-3.0
3,701,690	+				-3.3
3,701,702	+				-2.0
3,701,710	-				-2.4
3,701,710	-				-2.8
3,701,781	+				-3.1
3,701,789	-				-3.4
3,701,822	-				-1.1
3,701,852	+				-3.5
3,701,852	+				-0.4
3,701,860	-				-4.8
3,701,860	-				-1.0
3,701,860	-				-3.8
3,701,976	+		MIT1002_03317	0.17	-3.6
3,702,090	-		MIT1002_03317	0.35	-3.2
3,702,091	-		MIT1002_03317	0.35	-1.2
3,702,125	+		MIT1002_03317	0.40	-3.0
3,702,130	+		MIT1002_03317	0.41	-1.6
3,702,276	+		MIT1002_03317	0.63	-1.6
3,702,333	+		MIT1002_03317	0.71	-3.9
3,702,425	+		MIT1002_03317	0.85	-0.8
3,702,463	+				-0.8
3,702,471	+				-1.9
3,702,479	-				-0.8
3,702,479	-				-3.1
3,702,479	-				-1.7
3,702,504	-				-0.6
3,702,525	-				+0.5
3,702,558	+				-1.5
3,702,558	+				+0.7
3,702,596	+				-1.0
3,702,606	+				-2.6
3,702,614	-				-1.7
3,702,631	-				-3.7
3,702,631	-				+0.1
3,702,651	-				+0.5
3,702,813	-				-2.9
3,702,828	+				-0.2
3,702,828	+				-1.2
3,702,828	+				-1.6
3,702,838	+		MIT1002_03318	0.10	+1.6
3,702,846	-		MIT1002_03318	0.11	-1.1
3,702,846	-		MIT1002_03318	0.11	-1.0
3,702,861	+		MIT1002_03318	0.11	-2.8
3,702,892	-		MIT1002_03318	0.12	-0.1
3,702,938	-		MIT1002_03318	0.14	-1.2
3,703,002	+		MIT1002_03318	0.17	+0.0
3,703,057	+		MIT1002_03318	0.19	-1.3
3,703,065	-		MIT1002_03318	0.19	-3.0
3,703,069	+		MIT1002_03318	0.20	-0.4
3,703,112	+		MIT1002_03318	0.21	-1.6
3,703,123	+		MIT1002_03318	0.22	-1.4
3,703,131	-		MIT1002_03318	0.22	-0.4
3,703,161	+		MIT1002_03318	0.23	-1.3
3,703,262	+		MIT1002_03318	0.27	-0.8
3,703,262	+		MIT1002_03318	0.27	-4.3
3,703,262	+		MIT1002_03318	0.27	-1.0
3,703,270	-		MIT1002_03318	0.28	-1.4
3,703,275	-		MIT1002_03318	0.28	-2.3
3,703,386	-		MIT1002_03318	0.32	-1.0
3,703,420	-		MIT1002_03318	0.33	-2.3
3,703,431	+		MIT1002_03318	0.34	-3.2
3,703,432	-		MIT1002_03318	0.34	-0.6
3,703,474	+		MIT1002_03318	0.36	-1.3
3,703,479	-		MIT1002_03318	0.36	-0.4
3,703,494	-		MIT1002_03318	0.36	-3.4
3,703,557	-		MIT1002_03318	0.39	-1.6
3,703,563	-		MIT1002_03318	0.39	-2.3
3,703,622	-		MIT1002_03318	0.42	-1.4
3,703,627	+		MIT1002_03318	0.42	-2.2
3,703,635	-		MIT1002_03318	0.42	-2.0
3,703,792	+		MIT1002_03318	0.48	-3.6
3,703,915	-		MIT1002_03318	0.53	-2.8
3,703,924	+		MIT1002_03318	0.54	-2.8
3,703,932	-		MIT1002_03318	0.54	-2.0
3,703,964	-		MIT1002_03318	0.55	-3.2
3,704,011	+		MIT1002_03318	0.57	-3.1
3,704,065	-		MIT1002_03318	0.59	-0.6
3,704,150	+		MIT1002_03318	0.63	-2.0
3,704,177	+		MIT1002_03318	0.64	-2.6
3,704,179	-		MIT1002_03318	0.64	-1.0
3,704,203	+		MIT1002_03318	0.65	-2.1
3,704,203	+		MIT1002_03318	0.65	+2.1
3,704,211	-		MIT1002_03318	0.65	-1.3
3,704,211	-		MIT1002_03318	0.65	-2.7
3,704,211	-		MIT1002_03318	0.65	-1.6
3,704,211	-		MIT1002_03318	0.65	+0.2
3,704,213	-		MIT1002_03318	0.65	-2.8
3,704,322	+		MIT1002_03318	0.69	-1.4
3,704,347	+		MIT1002_03318	0.70	+1.0
3,704,497	+		MIT1002_03318	0.76	-0.6
3,704,522	-		MIT1002_03318	0.77	-3.0
3,704,563	+		MIT1002_03318	0.79	-0.8
3,704,563	+		MIT1002_03318	0.79	-0.2
3,704,563	+		MIT1002_03318	0.79	-1.0
3,704,718	+		MIT1002_03318	0.85	-2.1
3,704,819	-		MIT1002_03318	0.89	-1.0
3,704,861	-				+0.1
3,704,886	-				-0.1
3,704,886	-				-0.9
3,704,886	-				-2.1
3,704,943	-				-1.5
3,704,959	-				-1.9
3,704,967	-				-3.2
3,704,967	-				-3.4
3,705,053	-				-3.2
3,705,091	+				-2.0
3,705,163	+				-2.8
3,705,164	+				-0.6
3,705,171	-				-7.4
3,705,433	+		MIT1002_03319	0.30	-1.9
3,705,469	+		MIT1002_03319	0.33	-2.2
3,705,469	+		MIT1002_03319	0.33	-2.4
3,705,503	-		MIT1002_03319	0.36	-0.9
3,705,513	-		MIT1002_03319	0.37	+0.3
3,705,595	+		MIT1002_03319	0.43	-5.0
3,705,618	-		MIT1002_03319	0.45	-1.6
3,705,627	+		MIT1002_03319	0.46	-3.3
3,705,653	+		MIT1002_03319	0.48	-3.8
3,705,661	-		MIT1002_03319	0.49	-3.9
3,705,680	-		MIT1002_03319	0.51	-2.2
3,705,738	+		MIT1002_03319	0.55	-2.8
3,705,833	-		MIT1002_03319	0.63	-3.7
3,705,833	-		MIT1002_03319	0.63	-2.8
3,705,833	-		MIT1002_03319	0.63	-2.2
3,705,836	-		MIT1002_03319	0.64	-2.4
3,705,838	-		MIT1002_03319	0.64	-0.2
3,705,856	-		MIT1002_03319	0.65	+0.8
3,705,858	+		MIT1002_03319	0.65	-1.3
3,705,858	+		MIT1002_03319	0.65	-3.9
3,705,878	-		MIT1002_03319	0.67	+1.0
3,705,878	-		MIT1002_03319	0.67	-4.7
3,705,991	-		MIT1002_03319	0.77	-2.3
3,706,031	-		MIT1002_03319	0.80	-1.0
3,706,031	-		MIT1002_03319	0.80	-1.2
3,706,088	-		MIT1002_03319	0.85	-1.8
3,706,088	-		MIT1002_03319	0.85	-2.8