Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03313

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,695,667	+				+0.3
3,695,669	+				+1.0
3,695,675	-				+0.1
3,695,713	+		MIT1002_03312	0.13	+0.4
3,695,811	+		MIT1002_03312	0.24	-0.5
3,695,813	+		MIT1002_03312	0.24	-1.0
3,695,830	+		MIT1002_03312	0.26	-0.2
3,695,956	+		MIT1002_03312	0.40	-0.4
3,695,968	+		MIT1002_03312	0.42	+0.2
3,696,072	-		MIT1002_03312	0.53	+2.4
3,696,149	+		MIT1002_03312	0.62	+0.1
3,696,181	+		MIT1002_03312	0.65	-2.4
3,696,182	+		MIT1002_03312	0.65	+0.1
3,696,190	-		MIT1002_03312	0.66	+0.6
3,696,264	+		MIT1002_03312	0.74	+0.3
3,696,272	-		MIT1002_03312	0.75	+0.2
3,696,521	+				-1.4
3,696,529	-				-1.8
3,696,658	-				-0.7
3,696,699	-				-0.4
3,696,735	+				-1.0
3,696,763	+		MIT1002_03313	0.13	-2.4
3,696,817	-		MIT1002_03313	0.19	+0.8
3,696,817	-		MIT1002_03313	0.19	-0.8
3,696,831	+		MIT1002_03313	0.20	-0.9
3,696,860	+		MIT1002_03313	0.24	+0.3
3,696,881	-		MIT1002_03313	0.26	+0.7
3,696,916	+		MIT1002_03313	0.30	+1.1
3,696,929	-		MIT1002_03313	0.32	-0.4
3,696,991	+		MIT1002_03313	0.39	+0.9
3,697,065	-		MIT1002_03313	0.48	-0.1
3,697,066	+		MIT1002_03313	0.48	+0.4
3,697,073	+		MIT1002_03313	0.49	+0.7
3,697,077	-		MIT1002_03313	0.49	-0.8
3,697,096	+		MIT1002_03313	0.51	-1.2
3,697,111	+		MIT1002_03313	0.53	+0.5
3,697,111	+		MIT1002_03313	0.53	-0.2
3,697,112	-		MIT1002_03313	0.53	+0.2
3,697,119	-		MIT1002_03313	0.54	+0.5
3,697,119	-		MIT1002_03313	0.54	-0.6
3,697,119	-		MIT1002_03313	0.54	+1.1
3,697,119	-		MIT1002_03313	0.54	+0.3
3,697,135	+		MIT1002_03313	0.56	+1.6
3,697,148	-		MIT1002_03313	0.58	+0.6
3,697,185	-		MIT1002_03313	0.62	+0.6
3,697,237	+		MIT1002_03313	0.68	-1.4
3,697,237	+		MIT1002_03313	0.68	-1.6
3,697,237	+		MIT1002_03313	0.68	+0.3
3,697,237	+		MIT1002_03313	0.68	-2.1
3,697,237	+		MIT1002_03313	0.68	-0.7
3,697,237	+		MIT1002_03313	0.68	+0.3
3,697,243	-		MIT1002_03313	0.69	+1.1
3,697,245	-		MIT1002_03313	0.69	-1.2
3,697,245	-		MIT1002_03313	0.69	-0.4
3,697,245	-		MIT1002_03313	0.69	+1.9
3,697,245	-		MIT1002_03313	0.69	-2.8
3,697,252	+		MIT1002_03313	0.70	-3.4
3,697,260	-		MIT1002_03313	0.71	+1.2
3,697,276	-		MIT1002_03313	0.73	-0.4
3,697,319	-		MIT1002_03313	0.78	+0.5
3,697,334	-		MIT1002_03313	0.79	+0.5
3,697,335	+		MIT1002_03313	0.79	-0.9
3,697,340	+		MIT1002_03313	0.80	-0.4
3,697,340	+		MIT1002_03313	0.80	+0.8
3,697,340	+		MIT1002_03313	0.80	+1.9
3,697,341	+		MIT1002_03313	0.80	+1.6
3,697,341	+		MIT1002_03313	0.80	+3.3
3,697,341	-		MIT1002_03313	0.80	-0.3
3,697,343	-		MIT1002_03313	0.80	+0.4
3,697,343	-		MIT1002_03313	0.80	-0.5
3,697,343	-		MIT1002_03313	0.80	+0.6
3,697,348	-		MIT1002_03313	0.81	-0.4
3,697,348	-		MIT1002_03313	0.81	+1.5
3,697,348	-		MIT1002_03313	0.81	+1.1
3,697,348	-		MIT1002_03313	0.81	-1.6
3,697,348	-		MIT1002_03313	0.81	-1.9
3,697,348	-		MIT1002_03313	0.81	-0.8
3,697,348	-		MIT1002_03313	0.81	-0.2
3,697,348	-		MIT1002_03313	0.81	+1.1
3,697,348	-		MIT1002_03313	0.81	+0.3
3,697,348	-		MIT1002_03313	0.81	+1.3
3,697,348	-		MIT1002_03313	0.81	-0.2
3,697,348	-		MIT1002_03313	0.81	+1.1
3,697,350	+		MIT1002_03313	0.81	+1.4
3,697,362	-		MIT1002_03313	0.83	+0.8
3,697,388	+		MIT1002_03313	0.86	-0.9
3,697,393	+		MIT1002_03313	0.86	-0.1
3,697,393	+		MIT1002_03313	0.86	-0.2
3,697,398	+		MIT1002_03313	0.87	-0.8
3,697,398	+		MIT1002_03313	0.87	-0.2
3,697,401	-		MIT1002_03313	0.87	-0.8
3,697,404	+		MIT1002_03313	0.87	-0.1
3,697,407	-		MIT1002_03313	0.88	+0.7
3,697,407	-		MIT1002_03313	0.88	+1.6
3,697,407	-		MIT1002_03313	0.88	+0.9
3,697,412	-		MIT1002_03313	0.88	-1.0
3,697,412	-		MIT1002_03313	0.88	+1.0
3,697,413	-		MIT1002_03313	0.89	+1.0
3,697,419	-		MIT1002_03313	0.89	+1.4
3,697,426	+				+1.5
3,697,426	+				-0.3
3,697,434	-				-0.5
3,697,434	-				+0.2
3,697,450	+				+0.5
3,697,455	-				-0.9
3,697,458	-				-0.5
3,697,458	-				+0.5
3,697,468	-				-0.8
3,697,468	-				+0.0
3,697,482	-				-1.0
3,697,484	+				+1.8
3,697,493	+				+1.2
3,697,495	+				-0.8
3,697,501	-				-2.1
3,697,501	-				-1.4
3,697,505	+				-0.1
3,697,505	+				+0.2
3,697,505	+				-3.6
3,697,509	+				-2.5
3,697,513	-				-3.2
3,697,525	-				-1.8
3,697,525	-				-2.1
3,697,618	+				-1.2
3,697,619	+				-1.0
3,697,619	+				+2.1
3,697,619	+				-3.3
3,697,619	+				-0.7
3,697,619	+				-0.8
3,697,619	+				-2.4
3,697,619	+				+0.7
3,697,619	+				-2.4
3,697,619	+				-0.7
3,697,619	+				-2.3
3,697,619	+				-1.6
3,697,619	+				-1.6
3,697,619	+				-0.3
3,697,619	+				+0.8
3,697,622	+				-2.8
3,697,627	-				-0.6
3,697,627	-				-2.0
3,697,627	-				+1.0
3,697,627	-				+0.8
3,697,627	-				-0.1
3,697,627	-				-0.4
3,697,627	-				-0.4
3,697,627	-				-0.7
3,697,627	-				-2.9
3,697,629	+				+1.1
3,697,629	+				-1.0
3,697,629	+				-0.3
3,697,629	+				-1.5
3,697,629	+				-1.6
3,697,629	+				-0.4
3,697,629	+				-1.1
3,697,629	+				+0.2
3,697,629	+				+0.2
3,697,629	+				+1.2
3,697,629	+				+1.6
3,697,629	+				+0.1
3,697,629	+				-2.1
3,697,629	+				+1.3
3,697,629	+				+0.1
3,697,629	+				+0.2
3,697,629	+				-0.1
3,697,629	+				-1.5
3,697,629	+				+1.9
3,697,629	+				+0.7
3,697,629	+				+0.8
3,697,629	+				-0.9
3,697,629	+				+0.4
3,697,629	+				-0.1
3,697,629	+				-2.1
3,697,629	+				-1.7
3,697,629	+				-1.2
3,697,629	+				-1.1
3,697,629	+				-1.6
3,697,629	+				+0.9
3,697,629	+				-0.6
3,697,629	+				-0.5
3,697,629	+				+1.4
3,697,629	+				-0.3
3,697,629	+				-1.0
3,697,629	+				+0.8
3,697,629	+				-0.7
3,697,629	+				-1.4
3,697,629	+				+0.8
3,697,629	+				-1.8
3,697,629	+				-0.9
3,697,629	+				-1.6
3,697,629	+				-2.6
3,697,629	+				-0.0
3,697,629	+				-0.5
3,697,629	+				-0.4
3,697,634	+				-0.5
3,697,637	-				-1.0
3,697,637	-				+1.4
3,697,637	-				-0.8
3,697,637	-				+1.1
3,697,637	-				-0.2
3,697,637	-				-1.5
3,697,637	-				-1.9
3,697,637	-				+0.4
3,697,637	-				-1.5
3,697,637	-				-0.6
3,697,637	-				-4.2
3,697,637	-				-0.4
3,697,637	-				-1.2
3,697,637	-				+0.6
3,697,637	-				-0.9
3,697,637	-				+0.4
3,697,637	-				-1.4
3,697,637	-				-1.9
3,697,637	-				-0.6
3,697,637	-				-2.3
3,697,637	-				-0.7
3,697,637	-				-3.4
3,697,637	-				-0.9
3,697,637	-				-0.8
3,697,637	-				+0.7
3,697,637	-				+0.2
3,697,637	-				+2.2
3,697,637	-				+0.1
3,697,637	-				+0.4
3,697,637	-				-1.0
3,697,637	-				-4.7
3,697,637	-				-1.9
3,697,637	-				+0.7
3,697,637	-				-1.0
3,697,637	-				-0.7
3,697,637	-				+0.4
3,697,637	-				-0.6
3,697,637	-				-1.2
3,697,637	-				-1.8
3,697,637	-				-0.0
3,697,637	-				-3.4
3,697,637	-				-0.0
3,697,637	-				-1.9
3,697,637	-				-1.1
3,697,637	-				+0.5
3,697,637	-				+0.1
3,697,637	-				-0.8
3,697,637	-				-2.0
3,697,637	-				+6.4
3,697,637	-				-1.9
3,697,637	-				-0.0
3,697,637	-				+0.1
3,697,637	-				-0.1
3,697,637	-				+1.1
3,697,637	-				+1.6
3,697,637	-				+1.1
3,697,643	+				+0.0
3,697,643	+				+0.5
3,697,643	+				-0.6
3,697,643	+				-1.0
3,697,651	-				+0.1
3,697,651	-				-1.9
3,697,651	-				-1.2
3,697,651	-				-1.6
3,697,651	-				+1.4
3,697,651	-				-2.4
3,697,653	+				-0.1
3,697,653	+				-1.4
3,697,661	-				-2.4
3,697,661	-				-0.7
3,697,664	+				-1.5
3,697,672	-				+0.2
3,697,678	+				-0.4
3,697,683	-				+0.5
3,697,683	-				+3.1
3,697,689	+				+0.7
3,697,689	+				-0.1
3,697,690	+				-3.4
3,697,690	+				+0.1
3,697,690	+				-0.2
3,697,690	+				-0.0
3,697,690	+				-0.9
3,697,690	+				-0.0
3,697,690	+				-0.3
3,697,690	+				-0.0
3,697,690	+				+0.5
3,697,690	+				+0.2
3,697,690	+				-0.1
3,697,690	+				-0.5
3,697,690	+				+0.6
3,697,690	+				+1.0
3,697,690	+				+1.5
3,697,698	-				-1.0
3,697,698	-				-0.0
3,697,698	-				-1.2
3,697,698	-				-1.8
3,697,698	-				+0.6
3,697,698	-				-0.3
3,697,698	-				-1.8
3,697,698	-				-0.5
3,697,698	-				-1.5
3,697,698	-				+0.2
3,697,698	-				-0.2
3,697,698	-				+1.6
3,697,698	-				-0.4
3,697,698	-				-0.5
3,697,698	-				+1.9
3,697,698	-				-0.7
3,697,698	-				-1.0
3,697,698	-				-3.0
3,697,698	-				+0.7
3,697,699	-				-0.0
3,697,733	+				-0.7
3,697,733	+				-0.0
3,697,741	+				+0.0
3,697,741	-				-1.1
3,697,741	-				-1.7
3,697,746	+				+0.3
3,697,748	+				+0.4
3,697,748	+				+0.3
3,697,748	+				-1.6
3,697,756	-				-0.3
3,697,756	-				-2.1
3,697,756	-				+0.5
3,697,757	+				+0.4
3,697,781	+				-0.7
3,697,805	+				-0.2
3,697,805	+				-2.1
3,697,805	+				-0.4
3,697,805	+				-1.8
3,697,805	+				-3.8
3,697,813	-				-0.1
3,697,817	+				-2.6
3,697,817	+				+0.5
3,697,824	-				-1.8
3,697,825	+				-0.3
3,697,825	-				+0.2
3,697,829	+				+0.3
3,697,830	+				-0.3
3,697,830	+				+1.8
3,697,830	+				+0.4
3,697,830	+				-1.1
3,697,832	-				-0.3
3,697,833	-				-2.8
3,697,833	-				-2.6
3,697,833	-				+0.3
3,697,833	-				-0.5
3,697,836	+				-0.8
3,697,838	-				+0.8
3,697,838	-				-0.5
3,697,840	+				-2.6
3,697,840	+				-0.8
3,697,840	+				-3.6
3,697,840	+				-1.8
3,697,840	+				-2.5
3,697,840	+				-2.1
3,697,840	+				-2.8
3,697,840	+				-4.8
3,697,840	+				-0.5
3,697,840	+				+0.7
3,697,840	+				-2.5
3,697,841	+				-1.1
3,697,848	-				-0.8
3,697,848	-				-1.3
3,697,848	-				-4.1
3,697,848	-				+0.6
3,697,848	-				-1.7
3,697,848	-				-1.8
3,697,848	-				-2.5
3,697,848	-				-2.9
3,697,848	-				-0.1
3,697,848	-				-1.9
3,697,848	-				-2.0
3,697,848	-				-0.3
3,697,848	-				-6.8
3,697,848	-				-2.5
3,697,851	+				-0.3
3,697,871	-				+1.6
3,697,872	+				-2.0
3,697,872	+				+0.9
3,697,872	+				-0.3
3,697,872	+				-0.3
3,697,872	+				-1.9
3,697,880	-				-2.5
3,697,880	-				+0.1
3,697,880	-				-1.0
3,697,882	+				+1.2
3,697,882	+				-1.6
3,697,883	+				-0.2
3,697,883	+				-0.8
3,697,883	+				+0.0
3,697,883	+				-0.9
3,697,883	+				-1.5
3,697,883	+				-0.1
3,697,883	+				-2.8
3,697,883	+				-2.5
3,697,883	+				-0.5
3,697,883	+				+0.8
3,697,884	+				+1.3
3,697,884	+				-3.1
3,697,890	-		MIT1002_03314	0.10	-1.4
3,697,890	-		MIT1002_03314	0.10	+0.3
3,697,891	-		MIT1002_03314	0.10	-0.6
3,697,891	-		MIT1002_03314	0.10	-0.6
3,697,891	-		MIT1002_03314	0.10	+0.6
3,697,891	-		MIT1002_03314	0.10	-0.9
3,697,891	-		MIT1002_03314	0.10	-0.6
3,697,891	-		MIT1002_03314	0.10	-0.8
3,697,891	-		MIT1002_03314	0.10	-1.2
3,697,891	-		MIT1002_03314	0.10	+0.8
3,697,891	-		MIT1002_03314	0.10	-2.6
3,697,891	-		MIT1002_03314	0.10	+0.0
3,697,891	-		MIT1002_03314	0.10	-1.5
3,697,891	-		MIT1002_03314	0.10	+0.9
3,697,891	-		MIT1002_03314	0.10	-0.4
3,697,892	-		MIT1002_03314	0.10	+1.5
3,697,892	-		MIT1002_03314	0.10	-0.4
3,697,897	-		MIT1002_03314	0.11	-1.2
3,697,904	+		MIT1002_03314	0.11	-1.2
3,697,912	-		MIT1002_03314	0.12	-1.1
3,697,917	-		MIT1002_03314	0.13	-0.3
3,697,917	-		MIT1002_03314	0.13	+0.1
3,697,917	-		MIT1002_03314	0.13	-0.4
3,697,917	-		MIT1002_03314	0.13	+1.0
3,697,928	+		MIT1002_03314	0.13	+1.0
3,697,941	+		MIT1002_03314	0.14	-0.4
3,697,941	+		MIT1002_03314	0.14	+0.5
3,697,941	+		MIT1002_03314	0.14	-2.3
3,697,941	+		MIT1002_03314	0.14	-1.1
3,697,941	+		MIT1002_03314	0.14	-2.3
3,697,941	+		MIT1002_03314	0.14	-1.2
3,697,946	+		MIT1002_03314	0.15	+0.8
3,697,946	+		MIT1002_03314	0.15	+1.0
3,697,946	+		MIT1002_03314	0.15	+0.5
3,697,947	-		MIT1002_03314	0.15	-1.5
3,697,949	-		MIT1002_03314	0.15	-0.4
3,697,949	-		MIT1002_03314	0.15	-1.0
3,697,949	-		MIT1002_03314	0.15	-2.3
3,697,949	-		MIT1002_03314	0.15	-1.1
3,697,949	-		MIT1002_03314	0.15	-1.7
3,697,949	-		MIT1002_03314	0.15	-0.4
3,697,954	-		MIT1002_03314	0.16	+0.6
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