Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03261

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,632,911	+		MIT1002_03260	0.27	-0.4
3,632,917	+		MIT1002_03260	0.27	+0.9
3,632,925	-		MIT1002_03260	0.28	+0.6
3,632,948	+		MIT1002_03260	0.30	+0.7
3,633,048	+		MIT1002_03260	0.38	-2.0
3,633,048	+		MIT1002_03260	0.38	-1.9
3,633,054	-		MIT1002_03260	0.39	-1.0
3,633,096	+		MIT1002_03260	0.43	+0.9
3,633,109	-		MIT1002_03260	0.44	+0.4
3,633,127	-		MIT1002_03260	0.45	-0.1
3,633,244	+		MIT1002_03260	0.55	-0.1
3,633,244	+		MIT1002_03260	0.55	-2.3
3,633,252	-		MIT1002_03260	0.56	-1.8
3,633,252	-		MIT1002_03260	0.56	-0.4
3,633,282	-		MIT1002_03260	0.58	-0.8
3,633,363	-		MIT1002_03260	0.65	+0.4
3,633,402	-		MIT1002_03260	0.69	+1.8
3,633,409	+		MIT1002_03260	0.69	+0.8
3,633,409	+		MIT1002_03260	0.69	+2.7
3,633,427	-		MIT1002_03260	0.71	+0.3
3,633,434	-		MIT1002_03260	0.71	+0.0
3,633,573	-		MIT1002_03260	0.83	-0.2
3,633,597	-		MIT1002_03260	0.85	+1.3
3,633,699	-				+0.3
3,633,712	-				+0.7
3,633,713	-				+2.6
3,633,764	+				-0.8
3,633,805	+				-0.9
3,633,895	+				-0.6
3,633,895	+				-0.7
3,633,895	+				-1.9
3,633,895	+				-0.3
3,633,903	-				+1.8
3,633,903	-				+0.5
3,633,903	-				+0.0
3,633,903	-				+1.0
3,633,950	+		MIT1002_03261	0.16	-0.1
3,634,003	+		MIT1002_03261	0.32	+0.8
3,634,026	-		MIT1002_03261	0.39	+2.0
3,634,085	-		MIT1002_03261	0.56	+1.1
3,634,110	+		MIT1002_03261	0.64	+1.6
3,634,117	+		MIT1002_03261	0.66	-0.0
3,634,117	+		MIT1002_03261	0.66	+1.6
3,634,120	-		MIT1002_03261	0.67	+0.8
3,634,125	-		MIT1002_03261	0.68	+0.4
3,634,125	-		MIT1002_03261	0.68	-2.0
3,634,141	+		MIT1002_03261	0.73	+0.4
3,634,158	+		MIT1002_03261	0.78	+0.2
3,634,241	+				+1.4
3,634,249	-				-3.1
3,634,291	-				+0.4
3,634,316	+				+1.4
3,634,331	+				+0.4
3,634,333	+				-0.2
3,634,333	+				+2.3
3,634,339	-				-0.4
3,634,341	-				-2.0
3,634,351	-				+0.3
3,634,351	-				-2.8
3,634,392	-				+0.7
3,634,405	+				+1.1
3,634,410	+				-2.8
3,634,410	+				-0.5
3,634,410	+				-0.3
3,634,410	+				-1.6
3,634,418	-				+1.1
3,634,423	+				-1.0
3,634,583	+		MIT1002_03262	0.47	+0.6
3,634,591	-		MIT1002_03262	0.49	-1.0
3,634,677	-		MIT1002_03262	0.70	-0.2
3,634,699	-		MIT1002_03262	0.75	+0.4
3,634,706	-		MIT1002_03262	0.76	-1.4
3,634,769	-				-1.7
3,634,894	+				+0.3
3,634,894	+				-1.1
3,634,904	+				+0.7
3,634,917	-				+0.1
3,634,990	-				+1.7
3,635,016	+				-0.7
3,635,052	+				+1.6
3,635,170	+		MIT1002_03263	0.67	+0.8
3,635,170	+		MIT1002_03263	0.67	-0.0
3,635,170	+		MIT1002_03263	0.67	+1.1
3,635,178	-		MIT1002_03263	0.71	-2.5
3,635,225	-				+0.6