Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03250

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,619,127	-		MIT1002_03249	0.18	+1.1
3,619,195	+		MIT1002_03249	0.24	+0.9
3,619,196	+		MIT1002_03249	0.24	-0.0
3,619,207	+		MIT1002_03249	0.25	-0.6
3,619,219	+		MIT1002_03249	0.26	+0.3
3,619,302	+		MIT1002_03249	0.34	+0.6
3,619,304	+		MIT1002_03249	0.34	+0.8
3,619,375	+		MIT1002_03249	0.41	+0.1
3,619,381	+		MIT1002_03249	0.41	+0.4
3,619,427	-		MIT1002_03249	0.46	-0.5
3,619,441	+		MIT1002_03249	0.47	-0.4
3,619,457	+		MIT1002_03249	0.48	+1.1
3,619,502	+		MIT1002_03249	0.53	+0.3
3,619,510	-		MIT1002_03249	0.53	+0.5
3,619,536	+		MIT1002_03249	0.56	+0.1
3,619,544	-		MIT1002_03249	0.56	-0.8
3,619,563	+		MIT1002_03249	0.58	-1.8
3,619,566	-		MIT1002_03249	0.58	+1.1
3,619,633	-		MIT1002_03249	0.65	-1.1
3,619,690	+		MIT1002_03249	0.70	-1.3
3,619,805	+		MIT1002_03249	0.81	+0.0
3,619,817	+		MIT1002_03249	0.82	+1.6
3,619,818	-		MIT1002_03249	0.82	-0.8
3,619,830	-		MIT1002_03249	0.83	-2.8
3,619,830	-		MIT1002_03249	0.83	+0.6
3,619,861	+		MIT1002_03249	0.86	-1.2
3,619,861	+		MIT1002_03249	0.86	+1.4
3,619,865	+		MIT1002_03249	0.86	-2.8
3,619,987	+				+1.0
3,619,995	-				+0.0
3,620,014	-				+1.2
3,620,039	+				-0.9
3,620,039	+				+1.2
3,620,047	-				+0.6
3,620,073	-				-0.3
3,620,167	-				-2.5
3,620,207	+		MIT1002_03250	0.10	-0.8
3,620,212	+		MIT1002_03250	0.11	+2.9
3,620,220	-		MIT1002_03250	0.11	+1.2
3,620,257	-		MIT1002_03250	0.15	-3.2
3,620,298	+		MIT1002_03250	0.19	-2.5
3,620,298	+		MIT1002_03250	0.19	-2.0
3,620,306	-		MIT1002_03250	0.19	+1.3
3,620,306	-		MIT1002_03250	0.19	+0.0
3,620,313	+		MIT1002_03250	0.20	+0.1
3,620,314	-		MIT1002_03250	0.20	+0.4
3,620,321	-		MIT1002_03250	0.21	+0.9
3,620,321	-		MIT1002_03250	0.21	-0.3
3,620,354	-		MIT1002_03250	0.24	-0.2
3,620,356	+		MIT1002_03250	0.24	-0.9
3,620,363	+		MIT1002_03250	0.25	+1.1
3,620,364	-		MIT1002_03250	0.25	-1.0
3,620,364	-		MIT1002_03250	0.25	+0.3
3,620,371	-		MIT1002_03250	0.25	-0.7
3,620,437	-		MIT1002_03250	0.31	-0.2
3,620,443	+		MIT1002_03250	0.32	-0.2
3,620,450	+		MIT1002_03250	0.33	+0.6
3,620,451	-		MIT1002_03250	0.33	-1.1
3,620,462	+		MIT1002_03250	0.34	+0.7
3,620,470	-		MIT1002_03250	0.34	+0.3
3,620,496	-		MIT1002_03250	0.37	+1.7
3,620,551	+		MIT1002_03250	0.42	+0.6
3,620,554	+		MIT1002_03250	0.42	-0.4
3,620,611	-		MIT1002_03250	0.47	+1.8
3,620,611	-		MIT1002_03250	0.47	+0.3
3,620,611	-		MIT1002_03250	0.47	-1.8
3,620,611	-		MIT1002_03250	0.47	+0.8
3,620,687	+		MIT1002_03250	0.54	+0.1
3,620,694	+		MIT1002_03250	0.55	+2.3
3,620,702	-		MIT1002_03250	0.56	-0.5
3,620,704	+		MIT1002_03250	0.56	+2.6
3,620,712	-		MIT1002_03250	0.57	-1.0
3,620,792	-		MIT1002_03250	0.64	+1.9
3,620,809	-		MIT1002_03250	0.65	+0.5
3,620,840	+		MIT1002_03250	0.68	+1.0
3,620,840	+		MIT1002_03250	0.68	+0.0
3,620,840	+		MIT1002_03250	0.68	+0.5
3,620,848	-		MIT1002_03250	0.69	-0.5
3,620,848	-		MIT1002_03250	0.69	-0.4
3,620,848	-		MIT1002_03250	0.69	-2.2
3,620,848	-		MIT1002_03250	0.69	+0.2
3,620,848	-		MIT1002_03250	0.69	+0.7
3,620,918	+		MIT1002_03250	0.75	+0.9
3,620,918	+		MIT1002_03250	0.75	-2.0
3,620,921	-		MIT1002_03250	0.76	+0.4
3,620,938	+		MIT1002_03250	0.77	-0.3
3,620,938	+		MIT1002_03250	0.77	+0.4
3,620,938	+		MIT1002_03250	0.77	+1.7
3,620,938	+		MIT1002_03250	0.77	+1.6
3,621,021	-		MIT1002_03250	0.85	-1.9
3,621,023	+		MIT1002_03250	0.85	-1.7
3,621,023	+		MIT1002_03250	0.85	+0.7
3,621,028	+		MIT1002_03250	0.86	-2.0
3,621,031	-		MIT1002_03250	0.86	-0.1
3,621,131	+				-0.4
3,621,190	-				-1.4
3,621,248	+				+0.7
3,621,256	-				-2.1
3,621,285	+				+0.1
3,621,285	+				-0.2
3,621,285	-				+2.4
3,621,293	-				-0.5
3,621,301	+				+0.4
3,621,310	-				+0.0
3,621,314	+				+0.1
3,621,341	-				+0.1
3,621,440	-				-0.4
3,621,576	+				+1.9
3,621,643	-				+0.1
3,621,655	-				-2.1
3,621,724	-				+0.6
3,621,785	+				-2.9
3,621,793	-				-1.9
3,621,818	+				-1.3
3,621,834	+				+1.2
3,621,834	+				+1.7
3,621,834	+				-1.2
3,621,834	+				-1.8
3,621,835	+				+0.3
3,621,840	+				+0.8
3,621,842	-				+0.3
3,621,845	+				-2.4
3,621,848	-				+0.2
3,621,858	-				-0.6
3,621,861	+				+0.0
3,621,867	+				-1.0
3,621,869	-				-0.2
3,621,912	-				+0.7
3,621,920	-				-1.4
3,621,924	-				-2.8
3,621,961	-		MIT1002_03251	0.10	-0.0
3,622,123	+		MIT1002_03251	0.24	-0.9
3,622,123	+		MIT1002_03251	0.24	-1.0
3,622,123	+		MIT1002_03251	0.24	-0.0
3,622,130	-		MIT1002_03251	0.25	-0.2