Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03153

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,513,751	-		MIT1002_03152	0.51	-1.0
3,513,871	+		MIT1002_03152	0.60	+0.6
3,514,459	+				+0.5
3,514,575	-		MIT1002_03153	0.14	+1.9
3,514,619	-		MIT1002_03153	0.17	+0.9
3,514,628	+		MIT1002_03153	0.18	-0.6
3,514,633	+		MIT1002_03153	0.19	-0.3
3,514,633	+		MIT1002_03153	0.19	-0.8
3,514,633	+		MIT1002_03153	0.19	+0.9
3,514,633	+		MIT1002_03153	0.19	+0.1
3,514,633	+		MIT1002_03153	0.19	-0.4
3,514,633	+		MIT1002_03153	0.19	-0.2
3,514,636	-		MIT1002_03153	0.19	-0.4
3,514,641	-		MIT1002_03153	0.19	-0.3
3,514,658	+		MIT1002_03153	0.21	+1.1
3,514,658	+		MIT1002_03153	0.21	-3.1
3,514,704	+		MIT1002_03153	0.24	+0.5
3,514,821	-		MIT1002_03153	0.34	+1.0
3,514,831	+		MIT1002_03153	0.35	-0.4
3,514,845	+		MIT1002_03153	0.36	-0.1
3,514,846	+		MIT1002_03153	0.36	-0.9
3,514,867	-		MIT1002_03153	0.38	+0.6
3,514,899	+		MIT1002_03153	0.41	+1.3
3,514,907	-		MIT1002_03153	0.41	-1.0
3,514,939	-		MIT1002_03153	0.44	+0.2
3,515,038	+		MIT1002_03153	0.52	+0.4
3,515,078	+		MIT1002_03153	0.56	-3.1
3,515,092	-		MIT1002_03153	0.57	+3.4
3,515,094	+		MIT1002_03153	0.57	-1.2
3,515,130	-		MIT1002_03153	0.60	+0.2
3,515,392	-		MIT1002_03153	0.82	-0.1
3,515,409	+		MIT1002_03153	0.83	+1.7
3,515,466	+		MIT1002_03153	0.88	-0.8
3,515,623	-				-0.7
3,515,750	-				+2.2
3,515,799	+				-2.1
3,515,800	-				-1.6
3,515,800	-				-0.4
3,515,805	+				+0.1
3,515,807	-				-0.4
3,515,807	-				+0.2
3,515,807	-				-1.3
3,515,903	-		MIT1002_03154	0.17	-2.4
3,515,903	-		MIT1002_03154	0.17	+0.2
3,515,903	-		MIT1002_03154	0.17	+1.1
3,515,903	-		MIT1002_03154	0.17	+1.0
3,516,043	+		MIT1002_03154	0.28	+0.4
3,516,070	-		MIT1002_03154	0.30	-0.1
3,516,070	-		MIT1002_03154	0.30	-1.0
3,516,106	+		MIT1002_03154	0.33	+0.0
3,516,114	-		MIT1002_03154	0.34	+0.1
3,516,147	+		MIT1002_03154	0.36	+0.0
3,516,241	+		MIT1002_03154	0.44	-0.3
3,516,249	-		MIT1002_03154	0.45	+0.1
3,516,326	+		MIT1002_03154	0.51	+1.3
3,516,334	-		MIT1002_03154	0.51	-1.3
3,516,400	+		MIT1002_03154	0.57	+0.9
3,516,408	-		MIT1002_03154	0.57	-1.0
3,516,408	-		MIT1002_03154	0.57	-2.5
3,516,468	+		MIT1002_03154	0.62	+0.9
3,516,468	+		MIT1002_03154	0.62	-0.4
3,516,532	-		MIT1002_03154	0.67	+0.2
3,516,536	+		MIT1002_03154	0.67	-0.3
3,516,536	+		MIT1002_03154	0.67	+0.7
3,516,565	-		MIT1002_03154	0.70	+1.6