Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03063

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,415,621	-				+0.3
3,415,621	-				+3.2
3,415,626	+				+0.2
3,415,639	+				+0.4
3,415,670	-				-2.0
3,415,687	+				+0.8
3,415,712	+				-0.5
3,415,783	-				-5.5
3,415,816	-				-5.1
3,416,040	+		MIT1002_03062	0.36	-3.8
3,416,048	-		MIT1002_03062	0.37	-4.9
3,416,201	-		MIT1002_03062	0.56	-4.8
3,416,201	-		MIT1002_03062	0.56	-3.0
3,416,250	+		MIT1002_03062	0.62	-2.1
3,416,258	-		MIT1002_03062	0.63	-2.4
3,416,316	+		MIT1002_03062	0.70	-4.2
3,416,324	-		MIT1002_03062	0.71	-2.4
3,416,357	+		MIT1002_03062	0.75	-3.2
3,416,401	+		MIT1002_03062	0.80	-3.6
3,416,546	-				-1.4
3,416,726	-		MIT1002_03063	0.26	+0.4
3,416,750	-		MIT1002_03063	0.31	-2.3
3,416,790	+		MIT1002_03063	0.38	-0.7
3,416,827	-		MIT1002_03063	0.45	+0.1
3,416,827	-		MIT1002_03063	0.45	-0.6
3,416,833	-		MIT1002_03063	0.46	+0.8
3,416,843	+		MIT1002_03063	0.48	+0.8
3,416,843	+		MIT1002_03063	0.48	-2.1
3,416,851	-		MIT1002_03063	0.50	+1.5
3,416,851	-		MIT1002_03063	0.50	-2.5
3,416,919	-		MIT1002_03063	0.62	-2.0
3,416,919	-		MIT1002_03063	0.62	+0.1
3,416,936	+		MIT1002_03063	0.65	-0.4
3,416,936	+		MIT1002_03063	0.65	-0.1
3,416,936	+		MIT1002_03063	0.65	-0.6
3,416,936	+		MIT1002_03063	0.65	-1.5
3,416,936	+		MIT1002_03063	0.65	-0.2
3,416,936	+		MIT1002_03063	0.65	+1.2
3,417,041	+		MIT1002_03063	0.85	-1.6
3,417,139	-				+0.6
3,417,141	+				+0.8
3,417,239	+				+0.7
3,417,252	-				+2.2
3,417,571	+		MIT1002_03064	0.73	+0.3
3,417,579	-		MIT1002_03064	0.75	-0.2
3,417,609	+		MIT1002_03064	0.82	-0.3
3,417,809	+				-0.4
3,417,957	+				-0.5
3,417,957	+				+1.7
3,417,960	-				+0.2
3,417,960	-				-0.1
3,418,037	+				-2.4
3,418,057	+				+0.6
3,418,067	-				+0.6
3,418,089	-				+0.5
3,418,089	-				+0.1
3,418,091	+				+1.4
3,418,099	-				-1.9