Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03014

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,356,916	+				+0.7
3,357,033	+		MIT1002_03013	0.12	+0.5
3,357,063	+		MIT1002_03013	0.16	-0.4
3,357,168	-		MIT1002_03013	0.30	+0.6
3,357,173	-		MIT1002_03013	0.31	-0.6
3,357,173	-		MIT1002_03013	0.31	-1.3
3,357,173	-		MIT1002_03013	0.31	-1.0
3,357,225	+		MIT1002_03013	0.38	-1.8
3,357,246	-		MIT1002_03013	0.41	+0.1
3,357,373	-		MIT1002_03013	0.58	+0.9
3,357,396	-		MIT1002_03013	0.61	+0.1
3,357,427	+		MIT1002_03013	0.65	+0.2
3,357,434	+		MIT1002_03013	0.66	-1.4
3,357,441	+		MIT1002_03013	0.67	-2.0
3,357,568	+		MIT1002_03013	0.84	-0.1
3,357,568	+		MIT1002_03013	0.84	-2.3
3,357,568	+		MIT1002_03013	0.84	+0.7
3,357,568	+		MIT1002_03013	0.84	-1.0
3,357,568	+		MIT1002_03013	0.84	+0.1
3,357,568	+		MIT1002_03013	0.84	-0.2
3,357,568	+		MIT1002_03013	0.84	+0.0
3,357,573	+		MIT1002_03013	0.84	-1.6
3,357,574	-		MIT1002_03013	0.84	-1.8
3,357,576	-		MIT1002_03013	0.85	+0.5
3,357,576	-		MIT1002_03013	0.85	-0.2
3,357,576	-		MIT1002_03013	0.85	+0.8
3,357,635	-				-1.3
3,357,637	-				+0.4
3,357,653	+				-0.6
3,357,653	+				-1.0
3,357,660	+				-0.9
3,357,661	-				+0.5
3,357,692	+				-1.5
3,357,708	+				-0.9
3,357,729	-				+0.1
3,357,855	-		MIT1002_03014	0.13	-0.2
3,357,863	-		MIT1002_03014	0.17	-0.5
3,357,936	+		MIT1002_03014	0.49	-1.2
3,358,003	+		MIT1002_03014	0.78	-1.6
3,358,054	-				-0.5
3,358,089	+				+0.4
3,358,096	+				+0.1
3,358,129	+				+1.1
3,358,137	-				+1.3
3,358,142	-				+0.5
3,358,343	-				-4.6
3,358,538	+		MIT1002_03015	0.30	-0.6
3,358,546	-		MIT1002_03015	0.31	-4.2
3,358,600	+		MIT1002_03015	0.38	-0.5
3,358,709	+		MIT1002_03015	0.50	-2.5
3,358,711	-		MIT1002_03015	0.50	-1.9
3,358,713	+		MIT1002_03015	0.51	-1.8
3,358,719	+		MIT1002_03015	0.51	-3.1
3,358,724	+		MIT1002_03015	0.52	-1.6
3,358,772	+		MIT1002_03015	0.57	-1.3
3,358,778	-		MIT1002_03015	0.58	-3.7
3,358,780	-		MIT1002_03015	0.58	-4.2
3,358,780	-		MIT1002_03015	0.58	-4.7
3,358,820	+		MIT1002_03015	0.63	-3.2
3,358,865	+		MIT1002_03015	0.68	-2.9
3,359,001	-		MIT1002_03015	0.84	-2.6