Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02896

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,219,253	-		MIT1002_02894	0.88	+0.2
3,219,274	+		MIT1002_02894	0.89	+0.4
3,219,282	-		MIT1002_02894	0.90	+1.5
3,219,397	+				+0.9
3,219,411	+				-0.2
3,219,420	+				-2.5
3,219,420	-				+0.6
3,219,459	-				-0.0
3,219,599	+				+0.3
3,219,607	-				-0.7
3,219,627	+				-0.6
3,219,635	-				+1.5
3,219,662	-		MIT1002_02895	0.20	-3.4
3,219,753	-		MIT1002_02895	0.77	-0.7
3,219,756	+		MIT1002_02895	0.79	-1.5
3,219,797	-				-0.0
3,219,803	+				+1.9
3,219,843	-				-0.4
3,219,909	-				+0.3
3,219,962	-				-1.9
3,220,117	-				-1.0
3,220,166	+				+1.4
3,220,199	-				+1.1
3,220,250	+				+1.0
3,220,389	-		MIT1002_02896	0.31	+0.9
3,220,394	+		MIT1002_02896	0.32	+1.7
3,220,399	+		MIT1002_02896	0.33	+0.4
3,220,407	-		MIT1002_02896	0.35	+0.1
3,220,444	+		MIT1002_02896	0.42	-0.5
3,220,447	-		MIT1002_02896	0.43	+0.1
3,220,464	+		MIT1002_02896	0.46	+1.3
3,220,477	-		MIT1002_02896	0.49	-0.2
3,220,477	-		MIT1002_02896	0.49	+1.3
3,220,550	+		MIT1002_02896	0.64	+1.1
3,220,672	-		MIT1002_02896	0.88	-1.8
3,220,678	+		MIT1002_02896	0.89	-2.7
3,220,738	+				+0.8
3,220,801	-				-0.2
3,220,801	-				-1.5
3,220,819	-				-0.2
3,220,846	+				+0.6
3,220,854	-				+0.8
3,220,893	-				+0.3
3,220,898	-				-0.1
3,220,944	-				-0.9
3,220,952	-		MIT1002_02897	0.10	-3.9
3,221,007	-		MIT1002_02897	0.13	+1.2
3,221,133	+		MIT1002_02897	0.19	+2.9
3,221,148	+		MIT1002_02897	0.20	+2.3
3,221,166	-		MIT1002_02897	0.20	-0.1
3,221,166	-		MIT1002_02897	0.20	+0.1
3,221,166	-		MIT1002_02897	0.20	+1.8
3,221,166	-		MIT1002_02897	0.20	+0.4
3,221,166	-		MIT1002_02897	0.20	+1.2
3,221,166	-		MIT1002_02897	0.20	+0.0
3,221,176	-		MIT1002_02897	0.21	+0.1
3,221,207	-		MIT1002_02897	0.22	+0.6
3,221,224	+		MIT1002_02897	0.23	+0.9
3,221,363	+		MIT1002_02897	0.30	+0.2
3,221,493	-		MIT1002_02897	0.36	-1.0
3,221,585	+		MIT1002_02897	0.41	-0.8
3,221,585	+		MIT1002_02897	0.41	+0.6
3,221,599	+		MIT1002_02897	0.41	+1.0
3,221,633	+		MIT1002_02897	0.43	+0.2
3,221,636	-		MIT1002_02897	0.43	-1.4
3,221,641	-		MIT1002_02897	0.44	-0.1
3,221,657	-		MIT1002_02897	0.44	+0.7