Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02889

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,209,470	-		MIT1002_02888	0.51	+1.4
3,209,484	-		MIT1002_02888	0.52	+0.1
3,209,541	+		MIT1002_02888	0.55	-1.2
3,209,549	-		MIT1002_02888	0.55	+0.6
3,209,784	-		MIT1002_02888	0.67	+0.6
3,209,862	-		MIT1002_02888	0.71	+1.4
3,209,870	-		MIT1002_02888	0.71	+0.3
3,209,914	-		MIT1002_02888	0.73	-0.1
3,209,944	+		MIT1002_02888	0.75	-2.6
3,209,952	-		MIT1002_02888	0.75	-0.4
3,210,022	-		MIT1002_02888	0.79	+0.2
3,210,171	-		MIT1002_02888	0.86	-0.3
3,210,239	+		MIT1002_02888	0.89	-2.0
3,210,249	+		MIT1002_02888	0.90	+0.5
3,210,249	+		MIT1002_02888	0.90	+0.9
3,210,249	+		MIT1002_02888	0.90	-1.6
3,210,249	+		MIT1002_02888	0.90	-1.3
3,210,249	+		MIT1002_02888	0.90	-2.9
3,210,257	-				+1.0
3,210,257	-				+0.9
3,210,259	+				+0.1
3,210,259	+				-0.0
3,210,259	+				-0.2
3,210,336	-				-0.7
3,210,364	+				-0.5
3,210,364	+				+1.9
3,210,372	-				+1.9
3,210,372	-				-1.3
3,210,386	+				-1.1
3,210,386	+				+1.3
3,210,394	-				+2.4
3,210,421	+				+0.1
3,210,447	+				+0.9
3,210,509	-				-2.2
3,210,513	+				+0.3
3,210,521	-		MIT1002_02889	0.11	+1.1
3,210,523	+		MIT1002_02889	0.11	+0.8
3,210,531	-		MIT1002_02889	0.13	+0.5
3,210,531	-		MIT1002_02889	0.13	+1.2
3,210,566	-		MIT1002_02889	0.19	+0.1
3,210,683	+		MIT1002_02889	0.39	-0.8
3,210,688	+		MIT1002_02889	0.40	-0.5
3,210,696	-		MIT1002_02889	0.41	-0.7
3,210,696	-		MIT1002_02889	0.41	-0.6
3,210,726	+		MIT1002_02889	0.46	-0.1
3,210,729	-		MIT1002_02889	0.47	-2.3
3,210,734	-		MIT1002_02889	0.48	-1.1
3,210,772	-		MIT1002_02889	0.54	+0.2
3,210,795	-		MIT1002_02889	0.58	-3.1
3,210,827	+		MIT1002_02889	0.64	-3.2
3,210,852	+		MIT1002_02889	0.68	-1.1
3,211,029	+				+1.4
3,211,188	-				+0.2
3,211,195	+				+0.9
3,211,200	+				-2.5
3,211,208	-				-0.7
3,211,347	+				+1.0
3,211,376	+				-1.8
3,211,377	+				-0.5
3,211,384	-				-1.6
3,211,385	-				+1.1
3,211,385	-				+0.5
3,211,390	+				-1.8
3,211,392	+				+0.1
3,211,404	+				+0.1
3,211,412	-				+1.3
3,211,436	+				-0.3
3,211,441	+				+0.7
3,211,449	-				-0.2
3,211,449	-				-0.6
3,211,473	-				+2.1
3,211,473	-				+1.7
3,211,611	-				-0.5
3,211,611	-				-2.9
3,211,611	-				+0.8
3,211,611	-				-0.1
3,211,649	+				+0.9
3,211,733	+		MIT1002_02890	0.12	+1.0
3,211,741	-		MIT1002_02890	0.12	+0.9
3,211,766	+		MIT1002_02890	0.13	-1.5
3,211,771	+		MIT1002_02890	0.13	-0.5
3,211,779	+		MIT1002_02890	0.13	-0.6
3,211,779	-		MIT1002_02890	0.13	-0.3
3,211,786	-		MIT1002_02890	0.14	+0.6
3,211,787	-		MIT1002_02890	0.14	+0.5
3,211,805	+		MIT1002_02890	0.14	-1.9
3,211,823	+		MIT1002_02890	0.15	-0.2
3,211,831	-		MIT1002_02890	0.15	+1.7
3,211,849	+		MIT1002_02890	0.16	-0.8
3,211,861	+		MIT1002_02890	0.16	+0.2
3,211,867	-		MIT1002_02890	0.17	+0.5
3,211,877	+		MIT1002_02890	0.17	+1.3
3,211,884	+		MIT1002_02890	0.17	-1.7
3,211,884	+		MIT1002_02890	0.17	+0.2
3,211,892	-		MIT1002_02890	0.17	-0.5
3,211,904	+		MIT1002_02890	0.18	+0.4
3,211,912	-		MIT1002_02890	0.18	+0.9
3,212,024	+		MIT1002_02890	0.22	+0.6