Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02867

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,180,751	+		MIT1002_02866	0.13	+0.2
3,180,753	-		MIT1002_02866	0.13	-0.1
3,180,787	-		MIT1002_02866	0.16	-0.1
3,180,795	-		MIT1002_02866	0.17	+1.5
3,180,849	-		MIT1002_02866	0.22	+0.1
3,180,859	-		MIT1002_02866	0.23	-1.0
3,180,901	+		MIT1002_02866	0.27	+1.1
3,180,992	-		MIT1002_02866	0.35	-2.7
3,180,994	+		MIT1002_02866	0.35	-1.9
3,180,994	+		MIT1002_02866	0.35	+0.0
3,180,994	+		MIT1002_02866	0.35	+1.5
3,180,994	+		MIT1002_02866	0.35	+0.8
3,181,001	-		MIT1002_02866	0.36	-0.0
3,181,002	-		MIT1002_02866	0.36	-2.3
3,181,002	-		MIT1002_02866	0.36	+0.7
3,181,051	-		MIT1002_02866	0.40	-1.1
3,181,112	-		MIT1002_02866	0.46	-0.9
3,181,112	-		MIT1002_02866	0.46	-1.1
3,181,173	-		MIT1002_02866	0.52	-0.2
3,181,187	-		MIT1002_02866	0.53	+0.4
3,181,226	+		MIT1002_02866	0.57	+0.5
3,181,365	-		MIT1002_02866	0.70	-0.1
3,181,365	-		MIT1002_02866	0.70	-1.1
3,181,380	-		MIT1002_02866	0.71	+0.1
3,181,402	-		MIT1002_02866	0.73	-1.8
3,181,411	+		MIT1002_02866	0.74	+0.7
3,181,419	-		MIT1002_02866	0.75	-0.8
3,181,448	+		MIT1002_02866	0.77	+2.3
3,181,512	-		MIT1002_02866	0.83	-1.9
3,181,542	+		MIT1002_02866	0.86	-2.2
3,181,548	-		MIT1002_02866	0.86	+0.3
3,181,725	+				+0.6
3,181,750	+				-0.1
3,181,835	-		MIT1002_02867	0.11	-0.2
3,181,835	-		MIT1002_02867	0.11	-0.1
3,181,895	+		MIT1002_02867	0.15	-0.5
3,181,930	+		MIT1002_02867	0.17	+0.2
3,181,930	+		MIT1002_02867	0.17	+0.2
3,181,937	+		MIT1002_02867	0.18	-3.4
3,181,938	-		MIT1002_02867	0.18	-1.2
3,181,938	-		MIT1002_02867	0.18	+0.6
3,181,944	-		MIT1002_02867	0.18	+0.1
3,181,953	+		MIT1002_02867	0.19	+0.1
3,181,973	+		MIT1002_02867	0.20	+0.5
3,181,984	+		MIT1002_02867	0.21	+1.5
3,181,984	+		MIT1002_02867	0.21	+1.0
3,182,004	+		MIT1002_02867	0.22	+1.0
3,182,020	+		MIT1002_02867	0.24	+2.6
3,182,039	+		MIT1002_02867	0.25	+0.4
3,182,070	+		MIT1002_02867	0.27	+0.8
3,182,120	-		MIT1002_02867	0.30	+0.8
3,182,125	-		MIT1002_02867	0.31	+1.3
3,182,176	+		MIT1002_02867	0.34	-1.0
3,182,184	-		MIT1002_02867	0.35	-1.5
3,182,184	-		MIT1002_02867	0.35	+0.8
3,182,184	-		MIT1002_02867	0.35	+0.4
3,182,189	-		MIT1002_02867	0.35	+0.0
3,182,237	+		MIT1002_02867	0.38	+0.3
3,182,256	+		MIT1002_02867	0.39	+0.4
3,182,256	+		MIT1002_02867	0.39	-0.9
3,182,273	+		MIT1002_02867	0.41	+0.5
3,182,281	-		MIT1002_02867	0.41	-1.7
3,182,339	+		MIT1002_02867	0.45	-0.2
3,182,346	+		MIT1002_02867	0.45	-3.5
3,182,346	+		MIT1002_02867	0.45	+0.5
3,182,354	-		MIT1002_02867	0.46	-0.2
3,182,354	-		MIT1002_02867	0.46	+0.7
3,182,386	+		MIT1002_02867	0.48	+0.1
3,182,418	+		MIT1002_02867	0.50	+0.1
3,182,432	+		MIT1002_02867	0.51	-0.1
3,182,445	-		MIT1002_02867	0.52	+0.3
3,182,445	-		MIT1002_02867	0.52	+0.5
3,182,447	-		MIT1002_02867	0.52	+0.6
3,182,665	+		MIT1002_02867	0.67	+0.4
3,182,717	-		MIT1002_02867	0.70	-2.1
3,182,717	-		MIT1002_02867	0.70	-0.0
3,182,789	-		MIT1002_02867	0.75	-1.5
3,182,789	-		MIT1002_02867	0.75	-2.1
3,182,815	+		MIT1002_02867	0.77	-1.2
3,182,823	-		MIT1002_02867	0.77	-0.4
3,182,922	+		MIT1002_02867	0.84	-1.6
3,182,930	-		MIT1002_02867	0.85	+1.8
3,183,000	+		MIT1002_02867	0.89	-1.6
3,183,002	+		MIT1002_02867	0.90	+0.1
3,183,009	+				+0.0
3,183,010	-				+0.6
3,183,010	-				-1.1
3,183,015	-				-2.4
3,183,047	+				-0.4
3,183,047	+				-0.7
3,183,048	+				-0.3
3,183,055	-				-0.3
3,183,064	+				-0.4
3,183,072	-				+1.4
3,183,072	-				+0.6
3,183,072	-				+0.3
3,183,270	+				-0.5
3,183,272	-		MIT1002_02868	0.10	-0.3
3,183,272	-		MIT1002_02868	0.10	+0.7
3,183,289	+		MIT1002_02868	0.12	+1.0
3,183,361	-		MIT1002_02868	0.18	-0.9
3,183,361	-		MIT1002_02868	0.18	-1.2
3,183,566	+		MIT1002_02868	0.36	-0.8
3,183,657	-		MIT1002_02868	0.44	+0.6
3,183,775	+		MIT1002_02868	0.54	-0.5
3,183,807	+		MIT1002_02868	0.57	+0.2
3,183,843	-		MIT1002_02868	0.60	-0.5
3,183,843	-		MIT1002_02868	0.60	+1.3
3,184,005	+		MIT1002_02868	0.74	-0.4
3,184,023	+		MIT1002_02868	0.76	+3.5
3,184,023	+		MIT1002_02868	0.76	+0.7
3,184,023	-		MIT1002_02868	0.76	-1.9
3,184,031	-		MIT1002_02868	0.76	+0.3
3,184,047	+		MIT1002_02868	0.78	+0.5
3,184,081	+		MIT1002_02868	0.81	-0.5
3,184,118	-		MIT1002_02868	0.84	-0.5