Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02808

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,112,043	+		MIT1002_02807	0.36	-3.2
3,112,091	+		MIT1002_02807	0.42	-1.9
3,112,100	+		MIT1002_02807	0.43	-2.1
3,112,153	+		MIT1002_02807	0.50	-2.8
3,112,168	+		MIT1002_02807	0.52	-2.2
3,112,176	-		MIT1002_02807	0.53	-0.8
3,112,199	-		MIT1002_02807	0.56	-1.9
3,112,272	+		MIT1002_02807	0.65	-2.6
3,112,339	-		MIT1002_02807	0.74	-1.6
3,112,339	-		MIT1002_02807	0.74	-2.5
3,112,514	+				-1.3
3,112,540	+				-1.1
3,112,615	+				+0.6
3,112,615	+				-2.1
3,112,623	+				+0.7
3,112,623	+				+0.7
3,112,623	-				+0.8
3,112,623	-				-1.7
3,112,623	-				-0.2
3,112,704	-				-1.4
3,112,767	-				+0.9
3,112,860	+		MIT1002_02808	0.14	-2.7
3,112,860	+		MIT1002_02808	0.14	+0.3
3,112,865	-		MIT1002_02808	0.15	-0.2
3,112,875	+		MIT1002_02808	0.16	-1.6
3,113,004	+		MIT1002_02808	0.26	+0.6
3,113,025	+		MIT1002_02808	0.27	-0.9
3,113,025	+		MIT1002_02808	0.27	+0.3
3,113,028	+		MIT1002_02808	0.28	-0.2
3,113,033	-		MIT1002_02808	0.28	-0.7
3,113,089	+		MIT1002_02808	0.32	-1.9
3,113,097	-		MIT1002_02808	0.33	+1.3
3,113,135	+		MIT1002_02808	0.36	+3.6
3,113,209	+		MIT1002_02808	0.42	-0.5
3,113,284	-		MIT1002_02808	0.48	-0.4
3,113,458	+		MIT1002_02808	0.61	-0.2
3,113,491	+		MIT1002_02808	0.64	-2.1
3,113,491	+		MIT1002_02808	0.64	+0.4
3,113,524	+		MIT1002_02808	0.66	+0.1
3,113,527	-		MIT1002_02808	0.67	-1.5
3,113,527	-		MIT1002_02808	0.67	+0.3
3,113,527	-		MIT1002_02808	0.67	-0.2
3,113,644	+		MIT1002_02808	0.76	-0.8
3,113,664	-		MIT1002_02808	0.77	+0.1
3,113,690	+		MIT1002_02808	0.79	+1.2
3,113,707	+		MIT1002_02808	0.81	+0.0
3,113,777	+		MIT1002_02808	0.86	-0.3
3,113,794	-		MIT1002_02808	0.88	+1.8
3,113,833	-				+1.1
3,113,841	+				+1.0
3,113,846	+				-0.5
3,113,877	+				+0.4
3,113,939	-				+0.3
3,113,956	+				-4.0
3,113,966	+				+1.1
3,113,966	+				-0.4
3,113,993	+				+0.5
3,114,001	-				-0.8
3,114,134	+				-0.8
3,114,177	-		MIT1002_02809	0.13	+0.0
3,114,227	-		MIT1002_02809	0.18	-0.3
3,114,253	+		MIT1002_02809	0.21	+0.5
3,114,260	+		MIT1002_02809	0.22	-1.1
3,114,268	-		MIT1002_02809	0.23	+0.5
3,114,268	-		MIT1002_02809	0.23	-0.4
3,114,272	+		MIT1002_02809	0.23	+1.2
3,114,498	-		MIT1002_02809	0.49	+0.3
3,114,504	+		MIT1002_02809	0.49	-0.3
3,114,504	+		MIT1002_02809	0.49	-1.3
3,114,512	-		MIT1002_02809	0.50	+0.3
3,114,512	-		MIT1002_02809	0.50	+1.9
3,114,566	+		MIT1002_02809	0.56	+0.9
3,114,607	-		MIT1002_02809	0.61	+0.3
3,114,608	+		MIT1002_02809	0.61	-0.2
3,114,667	+		MIT1002_02809	0.67	-0.1
3,114,736	+		MIT1002_02809	0.75	+0.3
3,114,736	+		MIT1002_02809	0.75	+0.0
3,114,750	+		MIT1002_02809	0.77	-0.1
3,114,758	-		MIT1002_02809	0.78	-0.3
3,114,785	+		MIT1002_02809	0.81	-0.3
3,114,791	+		MIT1002_02809	0.81	+1.2
3,114,793	-		MIT1002_02809	0.81	+0.4
3,114,799	-		MIT1002_02809	0.82	-0.1
3,114,799	-		MIT1002_02809	0.82	+1.1
3,114,945	-				-2.2