Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02750

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
3,052,014	-				-0.0
3,052,054	+				+0.1
3,052,062	-				-0.8
3,052,095	+		MIT1002_02749	0.12	-1.1
3,052,098	-		MIT1002_02749	0.13	-0.8
3,052,103	-		MIT1002_02749	0.13	+0.4
3,052,188	+		MIT1002_02749	0.23	-1.1
3,052,345	-		MIT1002_02749	0.40	+1.2
3,052,345	-		MIT1002_02749	0.40	+1.5
3,052,345	-		MIT1002_02749	0.40	+0.1
3,052,356	-		MIT1002_02749	0.41	+1.1
3,052,357	+		MIT1002_02749	0.41	-0.3
3,052,440	+		MIT1002_02749	0.51	+1.2
3,052,583	-		MIT1002_02749	0.66	+2.8
3,052,583	-		MIT1002_02749	0.66	+0.3
3,052,783	-		MIT1002_02749	0.89	+1.2
3,052,795	+				+0.6
3,052,797	+				+2.7
3,052,804	+				+0.3
3,052,804	+				-1.0
3,052,805	-				-1.4
3,052,811	-				+0.7
3,052,812	-				-1.9
3,052,851	-				+0.5
3,052,851	-				-0.1
3,052,858	-				+0.1
3,052,869	+				-0.9
3,052,869	+				-0.2
3,052,872	-				+0.5
3,052,909	-				-0.1
3,052,934	+				+1.4
3,052,944	+				-0.9
3,052,944	+				-0.3
3,052,944	+				+2.6
3,052,952	-				+0.2
3,052,952	-				+0.8
3,052,952	-				-0.8
3,053,049	+				+0.5
3,053,098	-		MIT1002_02750	0.10	-0.1
3,053,098	-		MIT1002_02750	0.10	-0.1
3,053,236	+		MIT1002_02750	0.26	+0.4
3,053,256	+		MIT1002_02750	0.28	+0.9
3,053,386	+		MIT1002_02750	0.42	-0.5
3,053,428	+		MIT1002_02750	0.47	-0.7
3,053,564	+		MIT1002_02750	0.62	-1.3
3,053,572	-		MIT1002_02750	0.63	-1.2
3,053,604	-		MIT1002_02750	0.66	-0.7
3,053,626	+		MIT1002_02750	0.69	+1.1
3,053,634	-		MIT1002_02750	0.70	-0.2
3,053,676	+		MIT1002_02750	0.74	-0.6
3,053,810	-		MIT1002_02750	0.89	+0.3
3,053,810	-		MIT1002_02750	0.89	+1.3
3,053,849	-				+1.4
3,053,859	+				-1.3
3,053,876	+				+1.1
3,053,909	-				-0.3
3,053,914	+				-0.6
3,053,925	+				+0.0
3,053,933	-				-0.4
3,053,985	+				+0.0
3,054,029	+				-1.1
3,054,043	-				+0.4
3,054,072	+				-0.2
3,054,087	-				-1.1
3,054,112	+		MIT1002_02751	0.12	-0.1
3,054,120	-		MIT1002_02751	0.13	-0.8
3,054,179	+		MIT1002_02751	0.21	-1.8
3,054,187	-		MIT1002_02751	0.22	+1.2
3,054,200	-		MIT1002_02751	0.23	-2.4
3,054,246	+		MIT1002_02751	0.29	+1.1
3,054,246	-		MIT1002_02751	0.29	-3.9
3,054,303	-		MIT1002_02751	0.36	-0.3
3,054,303	-		MIT1002_02751	0.36	+0.2
3,054,328	+		MIT1002_02751	0.39	+0.0
3,054,343	-		MIT1002_02751	0.41	+1.1
3,054,378	+		MIT1002_02751	0.46	+0.7
3,054,408	-		MIT1002_02751	0.49	+0.3
3,054,438	-		MIT1002_02751	0.53	-0.3
3,054,505	+		MIT1002_02751	0.62	-0.7
3,054,508	-		MIT1002_02751	0.62	-0.8
3,054,528	+		MIT1002_02751	0.65	+0.3
3,054,560	+		MIT1002_02751	0.69	+2.3
3,054,594	-		MIT1002_02751	0.73	+0.7
3,054,615	-		MIT1002_02751	0.75	-0.3
3,054,615	-		MIT1002_02751	0.75	+0.0
3,054,675	+		MIT1002_02751	0.83	+0.4
3,054,690	+		MIT1002_02751	0.85	-1.5
3,054,735	+				-0.1
3,054,764	+				+0.8
3,054,781	+				-1.7
3,054,783	-				-0.1
3,054,795	+				+0.2
3,054,847	-				+0.9
3,054,884	-				-0.1
3,054,895	+				-0.4
3,054,895	+				-1.4
3,054,895	+				-2.1
3,054,895	+				+0.0
3,054,903	-				-0.0
3,054,903	-				+0.3
3,054,903	-				-2.2
3,054,904	+				-0.6