Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02676

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,976,459	-		MIT1002_02675	0.36	+1.0
2,976,496	-		MIT1002_02675	0.39	+0.7
2,976,506	-		MIT1002_02675	0.40	-1.3
2,976,549	+		MIT1002_02675	0.44	+0.9
2,976,553	+		MIT1002_02675	0.44	-0.2
2,976,558	+		MIT1002_02675	0.45	+0.1
2,976,566	-		MIT1002_02675	0.45	+1.9
2,976,583	+		MIT1002_02675	0.47	+0.2
2,976,583	+		MIT1002_02675	0.47	-0.6
2,976,591	-		MIT1002_02675	0.48	+0.1
2,976,598	-		MIT1002_02675	0.48	+0.7
2,976,626	+		MIT1002_02675	0.51	+0.7
2,976,626	+		MIT1002_02675	0.51	+0.0
2,976,634	-		MIT1002_02675	0.51	-0.7
2,976,675	-		MIT1002_02675	0.55	-0.1
2,976,680	-		MIT1002_02675	0.55	-0.3
2,976,680	-		MIT1002_02675	0.55	+1.8
2,976,720	-		MIT1002_02675	0.59	+1.9
2,976,758	+		MIT1002_02675	0.62	-2.1
2,976,758	+		MIT1002_02675	0.62	+0.9
2,976,758	+		MIT1002_02675	0.62	-1.8
2,976,758	+		MIT1002_02675	0.62	+1.0
2,976,766	-		MIT1002_02675	0.63	-0.4
2,976,766	-		MIT1002_02675	0.63	-0.3
2,976,766	-		MIT1002_02675	0.63	+0.6
2,976,766	-		MIT1002_02675	0.63	-0.9
2,976,766	-		MIT1002_02675	0.63	+1.3
2,976,835	+		MIT1002_02675	0.69	+0.4
2,976,850	+		MIT1002_02675	0.71	-1.7
2,976,889	+		MIT1002_02675	0.74	-0.1
2,976,939	+		MIT1002_02675	0.78	+0.9
2,977,025	-		MIT1002_02675	0.86	-1.1
2,977,050	+		MIT1002_02675	0.88	+0.3
2,977,052	+		MIT1002_02675	0.88	-0.5
2,977,060	-		MIT1002_02675	0.89	-1.3
2,977,063	+		MIT1002_02675	0.89	-2.0
2,977,063	+		MIT1002_02675	0.89	+1.0
2,977,071	-				+0.9
2,977,085	+				+1.8
2,977,100	+				-0.3
2,977,100	+				-3.4
2,977,100	+				+0.3
2,977,108	-				+0.5
2,977,108	-				-2.3
2,977,117	+				+0.6
2,977,125	-				-0.5
2,977,126	-				+1.7
2,977,155	-				-1.6
2,977,211	-				+2.2
2,977,427	+		MIT1002_02676	0.20	-0.5
2,977,504	-		MIT1002_02676	0.44	-1.5
2,977,537	-		MIT1002_02676	0.55	-0.2
2,977,573	-		MIT1002_02676	0.66	-2.9
2,977,614	+		MIT1002_02676	0.79	-0.5
2,977,617	-		MIT1002_02676	0.79	-2.5
2,977,658	-				-1.9
2,977,688	+				+0.3
2,977,688	+				-0.1
2,977,689	+				-0.5
2,977,689	+				-0.1
2,977,689	+				-0.2
2,977,696	-				+0.9
2,977,697	-				-0.8
2,977,697	-				+0.3
2,977,697	-				-0.4
2,977,697	-				+0.6
2,977,857	-				+0.6
2,977,896	+				+0.3
2,977,904	-				-1.8
2,978,050	+				-2.6
2,978,065	-				-2.4
2,978,116	-				-3.5
2,978,210	-		MIT1002_02677	0.11	-0.8
2,978,247	-		MIT1002_02677	0.13	-1.8
2,978,255	+		MIT1002_02677	0.13	-1.8
2,978,374	+		MIT1002_02677	0.18	+0.0
2,978,376	+		MIT1002_02677	0.18	-2.5
2,978,406	+		MIT1002_02677	0.19	-1.3
2,978,535	+		MIT1002_02677	0.24	+1.5
2,978,558	-		MIT1002_02677	0.25	-1.1
2,978,558	-		MIT1002_02677	0.25	-2.9
2,978,590	-		MIT1002_02677	0.26	-1.6
2,978,634	+		MIT1002_02677	0.28	-0.8
2,978,634	+		MIT1002_02677	0.28	-0.3
2,978,649	-		MIT1002_02677	0.29	-2.8
2,978,649	-		MIT1002_02677	0.29	+0.2