Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02674

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,974,107	-		MIT1002_02673	0.52	+0.8
2,974,109	+		MIT1002_02673	0.52	+1.2
2,974,109	-		MIT1002_02673	0.52	-0.3
2,974,119	+		MIT1002_02673	0.53	-0.6
2,974,152	+		MIT1002_02673	0.55	+1.1
2,974,157	+		MIT1002_02673	0.55	+0.7
2,974,160	-		MIT1002_02673	0.55	-0.3
2,974,160	-		MIT1002_02673	0.55	+0.8
2,974,160	-		MIT1002_02673	0.55	-3.0
2,974,199	-		MIT1002_02673	0.57	+0.6
2,974,232	-		MIT1002_02673	0.59	+0.7
2,974,232	-		MIT1002_02673	0.59	+2.2
2,974,237	+		MIT1002_02673	0.60	+0.6
2,974,328	+		MIT1002_02673	0.65	+0.7
2,974,336	-		MIT1002_02673	0.65	+0.3
2,974,336	-		MIT1002_02673	0.65	+1.0
2,974,336	-		MIT1002_02673	0.65	+0.8
2,974,412	-		MIT1002_02673	0.70	+0.9
2,974,438	-		MIT1002_02673	0.71	+0.3
2,974,438	-		MIT1002_02673	0.71	+2.0
2,974,515	-		MIT1002_02673	0.76	+0.7
2,974,743	+		MIT1002_02673	0.89	-2.9
2,974,745	-		MIT1002_02673	0.89	-0.4
2,974,805	+				+2.0
2,974,813	-				-0.0
2,974,813	-				+1.2
2,974,850	+				+0.9
2,974,851	+				+0.9
2,974,868	+				+1.6
2,974,881	-				-0.5
2,974,912	-				+1.5
2,975,018	+				+0.4
2,975,169	+				+0.7
2,975,212	+		MIT1002_02674	0.14	+0.8
2,975,270	+		MIT1002_02674	0.20	+0.4
2,975,278	+		MIT1002_02674	0.21	-1.1
2,975,286	-		MIT1002_02674	0.22	+1.4
2,975,297	-		MIT1002_02674	0.23	-0.2
2,975,337	+		MIT1002_02674	0.28	+0.4
2,975,345	+		MIT1002_02674	0.29	-1.2
2,975,345	+		MIT1002_02674	0.29	+0.0
2,975,353	-		MIT1002_02674	0.29	+1.2
2,975,353	-		MIT1002_02674	0.29	-0.4
2,975,353	-		MIT1002_02674	0.29	+1.4
2,975,355	-		MIT1002_02674	0.30	+1.2
2,975,445	+		MIT1002_02674	0.40	+0.6
2,975,453	-		MIT1002_02674	0.41	+1.6
2,975,497	+		MIT1002_02674	0.45	+1.6
2,975,527	+		MIT1002_02674	0.49	+1.2
2,975,667	+		MIT1002_02674	0.64	+0.1
2,975,685	-		MIT1002_02674	0.66	+1.4
2,975,685	-		MIT1002_02674	0.66	+0.5
2,975,722	+		MIT1002_02674	0.70	+2.5
2,975,761	+		MIT1002_02674	0.75	+1.7
2,975,820	-		MIT1002_02674	0.81	+1.2
2,975,820	-		MIT1002_02674	0.81	+1.6
2,975,904	-				-2.7
2,976,007	+				-0.7
2,976,192	+		MIT1002_02675	0.12	+0.6
2,976,200	-		MIT1002_02675	0.13	-0.3
2,976,286	+		MIT1002_02675	0.21	-0.1
2,976,286	+		MIT1002_02675	0.21	-0.0
2,976,286	+		MIT1002_02675	0.21	-2.9
2,976,294	-		MIT1002_02675	0.21	-0.3
2,976,294	-		MIT1002_02675	0.21	+1.9
2,976,459	-		MIT1002_02675	0.36	+1.0
2,976,496	-		MIT1002_02675	0.39	+0.7
2,976,506	-		MIT1002_02675	0.40	-1.3
2,976,549	+		MIT1002_02675	0.44	+0.9
2,976,553	+		MIT1002_02675	0.44	-0.2
2,976,558	+		MIT1002_02675	0.45	+0.1
2,976,566	-		MIT1002_02675	0.45	+1.9
2,976,583	+		MIT1002_02675	0.47	+0.2
2,976,583	+		MIT1002_02675	0.47	-0.6
2,976,591	-		MIT1002_02675	0.48	+0.1
2,976,598	-		MIT1002_02675	0.48	+0.7
2,976,626	+		MIT1002_02675	0.51	+0.7
2,976,626	+		MIT1002_02675	0.51	+0.0
2,976,634	-		MIT1002_02675	0.51	-0.7
2,976,675	-		MIT1002_02675	0.55	-0.1
2,976,680	-		MIT1002_02675	0.55	-0.3
2,976,680	-		MIT1002_02675	0.55	+1.8
2,976,720	-		MIT1002_02675	0.59	+1.9
2,976,758	+		MIT1002_02675	0.62	-2.1
2,976,758	+		MIT1002_02675	0.62	+0.9
2,976,758	+		MIT1002_02675	0.62	-1.8
2,976,758	+		MIT1002_02675	0.62	+1.0
2,976,766	-		MIT1002_02675	0.63	-0.4
2,976,766	-		MIT1002_02675	0.63	-0.3
2,976,766	-		MIT1002_02675	0.63	+0.6
2,976,766	-		MIT1002_02675	0.63	-0.9
2,976,766	-		MIT1002_02675	0.63	+1.3
2,976,835	+		MIT1002_02675	0.69	+0.4
2,976,850	+		MIT1002_02675	0.71	-1.7
2,976,889	+		MIT1002_02675	0.74	-0.1
2,976,939	+		MIT1002_02675	0.78	+0.9