Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02670

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,966,645	-		MIT1002_02669	0.14	+1.5
2,966,660	-		MIT1002_02669	0.15	+0.4
2,966,660	-		MIT1002_02669	0.15	-0.3
2,966,676	+		MIT1002_02669	0.17	+0.0
2,966,684	-		MIT1002_02669	0.18	+1.3
2,966,684	-		MIT1002_02669	0.18	+0.1
2,966,806	+		MIT1002_02669	0.31	-0.1
2,966,806	+		MIT1002_02669	0.31	+1.8
2,966,875	-		MIT1002_02669	0.38	+0.7
2,966,908	-		MIT1002_02669	0.42	-1.0
2,967,099	-		MIT1002_02669	0.62	-0.7
2,967,112	-		MIT1002_02669	0.63	-0.3
2,967,169	+		MIT1002_02669	0.69	-0.4
2,967,169	+		MIT1002_02669	0.69	+0.4
2,967,177	-		MIT1002_02669	0.70	+1.1
2,967,245	+		MIT1002_02669	0.78	-2.7
2,967,248	-		MIT1002_02669	0.78	-0.7
2,967,253	-		MIT1002_02669	0.78	-1.9
2,967,253	-		MIT1002_02669	0.78	-0.5
2,967,370	+				-0.0
2,967,378	-				-0.8
2,967,378	-				+2.3
2,967,405	+				-0.4
2,967,405	+				-2.0
2,967,412	-				+0.8
2,967,413	-				+0.8
2,967,659	+				+1.3
2,967,709	-		MIT1002_02670	0.11	-0.8
2,967,746	+		MIT1002_02670	0.15	-0.1
2,967,865	+		MIT1002_02670	0.28	-2.3
2,967,865	+		MIT1002_02670	0.28	-1.1
2,967,865	-		MIT1002_02670	0.28	-1.1
2,967,972	+		MIT1002_02670	0.40	-0.2
2,967,978	+		MIT1002_02670	0.40	+1.0
2,967,979	+		MIT1002_02670	0.40	-0.5
2,967,980	-		MIT1002_02670	0.41	-1.6
2,967,980	-		MIT1002_02670	0.41	+0.6
2,967,986	-		MIT1002_02670	0.41	+0.6
2,967,997	+		MIT1002_02670	0.42	-0.8
2,968,005	-		MIT1002_02670	0.43	+0.6
2,968,005	-		MIT1002_02670	0.43	-0.4
2,968,149	-		MIT1002_02670	0.59	-0.6
2,968,233	-		MIT1002_02670	0.68	+0.1
2,968,237	+		MIT1002_02670	0.69	-0.5
2,968,242	+		MIT1002_02670	0.69	+1.6
2,968,249	+		MIT1002_02670	0.70	-0.2
2,968,276	-		MIT1002_02670	0.73	+0.4
2,968,291	+		MIT1002_02670	0.75	+0.1
2,968,299	-		MIT1002_02670	0.76	+0.3
2,968,299	-		MIT1002_02670	0.76	+1.4
2,968,414	+		MIT1002_02670	0.88	+0.5
2,968,465	+				+0.8
2,968,476	-				-1.3
2,968,504	+				+1.8
2,968,505	-				-1.7
2,968,516	+				+0.6
2,968,654	+				-0.0
2,968,654	+				+3.1
2,968,672	-				-0.2
2,968,721	+				-0.3
2,968,777	+				+0.8
2,968,785	-				-0.3
2,968,890	-				-2.0
2,968,926	-		MIT1002_02671	0.11	-0.2
2,968,926	-		MIT1002_02671	0.11	-0.4
2,968,926	-		MIT1002_02671	0.11	-1.1
2,969,013	+		MIT1002_02671	0.14	+0.1
2,969,045	+		MIT1002_02671	0.15	+0.8
2,969,092	-		MIT1002_02671	0.17	-0.8
2,969,107	-		MIT1002_02671	0.17	-0.0
2,969,132	-		MIT1002_02671	0.18	+0.5
2,969,153	+		MIT1002_02671	0.19	+0.5
2,969,153	+		MIT1002_02671	0.19	-3.0
2,969,158	-		MIT1002_02671	0.19	+0.5
2,969,249	-		MIT1002_02671	0.22	-1.6
2,969,259	-		MIT1002_02671	0.22	+0.8
2,969,316	-		MIT1002_02671	0.24	-0.2
2,969,316	-		MIT1002_02671	0.24	+0.2
2,969,333	+		MIT1002_02671	0.25	+0.4
2,969,395	-		MIT1002_02671	0.27	-1.6
2,969,485	+		MIT1002_02671	0.30	-1.5