Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02648

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,943,520	+				-3.5
2,943,521	+				-2.3
2,943,553	-				-3.3
2,943,850	-				-0.5
2,943,860	-				-1.3
2,943,882	+				+0.2
2,943,889	+				-0.1
2,943,941	-				-0.8
2,943,953	-				-1.6
2,943,953	-				+0.1
2,943,962	+				+3.7
2,943,963	-				-1.0
2,943,995	+		MIT1002_02648	0.11	+0.3
2,944,003	-		MIT1002_02648	0.11	-1.1
2,944,128	-		MIT1002_02648	0.18	-0.8
2,944,267	-		MIT1002_02648	0.25	-1.6
2,944,267	-		MIT1002_02648	0.25	+1.1
2,944,339	+		MIT1002_02648	0.29	+0.3
2,944,339	+		MIT1002_02648	0.29	-0.5
2,944,339	+		MIT1002_02648	0.29	+0.3
2,944,347	-		MIT1002_02648	0.29	+0.9
2,944,347	-		MIT1002_02648	0.29	-0.8
2,944,347	-		MIT1002_02648	0.29	+1.5
2,944,427	+		MIT1002_02648	0.33	-1.4
2,944,434	+		MIT1002_02648	0.34	-0.2
2,944,447	+		MIT1002_02648	0.34	-1.2
2,944,457	+		MIT1002_02648	0.35	-0.9
2,944,457	+		MIT1002_02648	0.35	-0.7
2,944,457	+		MIT1002_02648	0.35	-0.7
2,944,465	-		MIT1002_02648	0.35	+0.4
2,944,532	-		MIT1002_02648	0.39	-0.2
2,944,621	-		MIT1002_02648	0.43	-1.9
2,944,629	-		MIT1002_02648	0.44	-0.9
2,944,729	+		MIT1002_02648	0.49	-2.1
2,944,737	-		MIT1002_02648	0.49	-1.6
2,944,737	-		MIT1002_02648	0.49	-1.6
2,944,778	+		MIT1002_02648	0.52	-0.1
2,944,778	+		MIT1002_02648	0.52	+0.5
2,944,778	+		MIT1002_02648	0.52	-1.6
2,944,786	-		MIT1002_02648	0.52	+0.2
2,944,786	-		MIT1002_02648	0.52	+0.3
2,944,786	-		MIT1002_02648	0.52	+0.1
2,944,786	-		MIT1002_02648	0.52	-0.5
2,944,967	-		MIT1002_02648	0.61	+0.5
2,944,968	+		MIT1002_02648	0.61	-0.5
2,944,976	-		MIT1002_02648	0.62	-0.3
2,945,127	-		MIT1002_02648	0.70	+0.4
2,945,314	+		MIT1002_02648	0.79	-0.7
2,945,858	+				-0.4
2,945,903	-				-2.0
2,945,946	+				-1.6
2,945,946	+				+1.2
2,945,946	+				-1.3
2,945,954	-				+0.3
2,945,954	-				+0.1
2,945,954	-				-0.5
2,945,954	-				+0.5
2,945,987	-				-0.7
2,946,045	-		MIT1002_02649	0.16	+1.6
2,946,096	-		MIT1002_02649	0.24	+0.1
2,946,166	+		MIT1002_02649	0.36	+1.5
2,946,170	+		MIT1002_02649	0.37	+0.2
2,946,234	+		MIT1002_02649	0.47	-2.2
2,946,248	+		MIT1002_02649	0.50	+1.1
2,946,250	+		MIT1002_02649	0.50	-1.4
2,946,325	+		MIT1002_02649	0.63	-0.4
2,946,372	-		MIT1002_02649	0.70	-0.8
2,946,372	-		MIT1002_02649	0.70	+0.1
2,946,372	-		MIT1002_02649	0.70	-1.0
2,946,403	-		MIT1002_02649	0.76	+2.5
2,946,407	+		MIT1002_02649	0.76	+0.1
2,946,413	-		MIT1002_02649	0.77	-0.2
2,946,445	+		MIT1002_02649	0.83	+0.8
2,946,463	+		MIT1002_02649	0.86	-0.3
2,946,471	-		MIT1002_02649	0.87	-0.5
2,946,488	-		MIT1002_02649	0.90	+1.3
2,946,661	-		MIT1002_02650	0.11	-0.5
2,946,670	-		MIT1002_02650	0.12	+1.0
2,946,670	-		MIT1002_02650	0.12	+0.9