Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02640

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,931,782	+		MIT1002_02638	0.76	-4.4
2,931,795	-		MIT1002_02638	0.77	-1.6
2,931,836	+		MIT1002_02638	0.82	-4.6
2,931,895	+		MIT1002_02638	0.90	-2.1
2,931,903	-				-4.1
2,931,903	-				-2.1
2,931,939	-				-5.7
2,931,945	+				-0.4
2,931,958	+				-1.2
2,931,966	+				+0.5
2,931,974	-				-3.6
2,932,059	+		MIT1002_02639	0.13	-3.1
2,932,069	+		MIT1002_02639	0.15	-2.6
2,932,080	+		MIT1002_02639	0.17	-1.1
2,932,080	+		MIT1002_02639	0.17	-3.6
2,932,080	+		MIT1002_02639	0.17	-6.9
2,932,088	-		MIT1002_02639	0.18	-3.9
2,932,112	+		MIT1002_02639	0.22	-5.7
2,932,153	-		MIT1002_02639	0.29	-3.1
2,932,153	-		MIT1002_02639	0.29	-3.2
2,932,179	-		MIT1002_02639	0.33	-1.6
2,932,259	-		MIT1002_02639	0.46	-2.4
2,932,259	-		MIT1002_02639	0.46	-2.8
2,932,292	+		MIT1002_02639	0.51	-3.5
2,932,307	-		MIT1002_02639	0.54	-5.3
2,932,330	+		MIT1002_02639	0.57	-5.1
2,932,330	+		MIT1002_02639	0.57	-3.2
2,932,338	-		MIT1002_02639	0.59	-6.1
2,932,385	+		MIT1002_02639	0.66	-3.8
2,932,415	-		MIT1002_02639	0.71	-5.3
2,932,473	-		MIT1002_02639	0.80	-6.3
2,932,676	-				+0.1
2,932,694	+				-0.3
2,932,694	+				+0.2
2,932,694	+				+0.2
2,932,797	+				-1.6
2,932,807	-				-0.2
2,932,861	-		MIT1002_02640	0.13	-0.8
2,932,888	+		MIT1002_02640	0.16	-0.8
2,932,890	+		MIT1002_02640	0.16	+0.7
2,932,910	+		MIT1002_02640	0.18	-0.5
2,932,910	+		MIT1002_02640	0.18	-0.9
2,932,910	+		MIT1002_02640	0.18	-2.5
2,932,910	+		MIT1002_02640	0.18	-0.6
2,932,913	-		MIT1002_02640	0.19	+1.6
2,932,918	-		MIT1002_02640	0.19	-0.7
2,932,990	+		MIT1002_02640	0.28	+1.2
2,932,998	-		MIT1002_02640	0.29	+1.0
2,932,998	-		MIT1002_02640	0.29	+1.3
2,933,065	-		MIT1002_02640	0.36	-0.7
2,933,123	-		MIT1002_02640	0.43	-0.6
2,933,200	-		MIT1002_02640	0.52	+1.1
2,933,244	+		MIT1002_02640	0.57	-0.1
2,933,251	+		MIT1002_02640	0.58	-0.8
2,933,259	-		MIT1002_02640	0.59	-2.0
2,933,264	-		MIT1002_02640	0.60	+0.8
2,933,318	+		MIT1002_02640	0.66	+1.5
2,933,398	-		MIT1002_02640	0.75	-1.3
2,933,408	-		MIT1002_02640	0.76	-1.0
2,933,584	+				-0.5
2,933,611	+				+0.6
2,933,753	+				-1.6
2,933,863	+		MIT1002_02641	0.19	+1.5
2,933,944	+		MIT1002_02641	0.28	+1.9
2,933,944	+		MIT1002_02641	0.28	-0.3
2,933,944	+		MIT1002_02641	0.28	-0.4
2,934,009	-		MIT1002_02641	0.36	-0.7
2,934,108	-		MIT1002_02641	0.48	+0.5
2,934,147	-		MIT1002_02641	0.52	+1.9
2,934,147	-		MIT1002_02641	0.52	+1.6
2,934,161	+		MIT1002_02641	0.54	-0.1
2,934,164	-		MIT1002_02641	0.54	+0.5
2,934,260	+		MIT1002_02641	0.66	+1.9
2,934,379	-		MIT1002_02641	0.80	-0.4
2,934,410	+		MIT1002_02641	0.84	+0.1
2,934,410	+		MIT1002_02641	0.84	+0.3
2,934,424	-		MIT1002_02641	0.85	-2.9
2,934,495	+				+0.4
2,934,500	+				+0.0
2,934,507	+				+0.9
2,934,521	+				+0.4
2,934,548	+				+1.4
2,934,599	-				-1.1
2,934,610	-				-0.1