Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02535

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,828,840	-				-0.4
2,828,891	+				+0.9
2,828,950	+				-0.0
2,828,950	+				-3.1
2,828,958	-				+1.2
2,829,030	-				-2.0
2,829,030	-				-0.1
2,829,083	+				+0.1
2,829,083	+				+2.3
2,829,091	-				-1.2
2,829,091	-				-0.7
2,829,101	-				+0.3
2,829,121	-				-1.9
2,829,194	+		MIT1002_02534	0.19	-0.9
2,829,202	-		MIT1002_02534	0.20	-0.4
2,829,219	+		MIT1002_02534	0.22	-0.5
2,829,219	-		MIT1002_02534	0.22	+0.3
2,829,234	+		MIT1002_02534	0.24	+0.1
2,829,249	-		MIT1002_02534	0.27	+1.0
2,829,342	-		MIT1002_02534	0.40	-0.5
2,829,448	+		MIT1002_02534	0.56	-0.2
2,829,509	-		MIT1002_02534	0.64	+1.0
2,829,558	-		MIT1002_02534	0.71	+0.9
2,829,577	-		MIT1002_02534	0.74	-0.2
2,829,588	+		MIT1002_02534	0.76	+0.5
2,829,596	-		MIT1002_02534	0.77	+1.4
2,829,644	-		MIT1002_02534	0.84	+0.3
2,829,644	-		MIT1002_02534	0.84	-0.9
2,829,810	-				+0.7
2,829,882	+		MIT1002_02535	0.29	-0.4
2,829,889	+		MIT1002_02535	0.31	+0.8
2,829,890	-		MIT1002_02535	0.32	-3.1
2,829,922	+		MIT1002_02535	0.42	-0.1
2,829,992	+		MIT1002_02535	0.66	-2.1
2,830,077	+				+0.6
2,830,156	+		MIT1002_02536	0.29	-0.0
2,830,409	+				-1.3
2,830,409	+				+0.1
2,830,416	+				+0.1
2,830,452	+				+1.2
2,830,511	+				-0.4