Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02432

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,715,170	-		MIT1002_02431	0.30	+1.3
2,715,184	+		MIT1002_02431	0.31	-3.6
2,715,184	+		MIT1002_02431	0.31	-0.6
2,715,192	-		MIT1002_02431	0.31	-0.8
2,715,206	-		MIT1002_02431	0.32	-0.0
2,715,215	+		MIT1002_02431	0.33	-0.1
2,715,239	-		MIT1002_02431	0.35	-1.1
2,715,241	+		MIT1002_02431	0.35	+2.1
2,715,267	+		MIT1002_02431	0.37	+0.9
2,715,296	+		MIT1002_02431	0.39	+0.2
2,715,296	+		MIT1002_02431	0.39	+0.4
2,715,328	+		MIT1002_02431	0.41	-1.4
2,715,328	+		MIT1002_02431	0.41	-1.1
2,715,328	-		MIT1002_02431	0.41	-1.7
2,715,335	-		MIT1002_02431	0.42	-0.9
2,715,336	-		MIT1002_02431	0.42	+0.3
2,715,363	+		MIT1002_02431	0.44	+1.2
2,715,404	+		MIT1002_02431	0.46	-0.8
2,715,412	-		MIT1002_02431	0.47	+1.3
2,715,420	-		MIT1002_02431	0.48	-0.4
2,715,477	+		MIT1002_02431	0.52	-1.9
2,715,526	+		MIT1002_02431	0.55	+1.0
2,715,529	-		MIT1002_02431	0.55	-0.9
2,715,533	+		MIT1002_02431	0.56	+0.0
2,715,579	+		MIT1002_02431	0.59	-0.2
2,715,587	-		MIT1002_02431	0.59	-0.2
2,715,641	+		MIT1002_02431	0.63	-0.5
2,715,644	-		MIT1002_02431	0.63	+0.4
2,715,661	+		MIT1002_02431	0.65	+0.9
2,715,693	-		MIT1002_02431	0.67	-1.4
2,715,697	+		MIT1002_02431	0.67	-0.5
2,715,725	+		MIT1002_02431	0.69	-0.1
2,715,820	-		MIT1002_02431	0.76	-0.0
2,715,866	+		MIT1002_02431	0.79	-3.0
2,715,876	-		MIT1002_02431	0.80	+0.6
2,715,876	-		MIT1002_02431	0.80	-0.9
2,715,876	-		MIT1002_02431	0.80	-0.2
2,715,923	-		MIT1002_02431	0.83	+0.0
2,715,925	-		MIT1002_02431	0.83	+0.1
2,715,967	+		MIT1002_02431	0.86	-0.2
2,716,019	-		MIT1002_02431	0.90	+0.8
2,716,023	+				+0.6
2,716,064	-				+0.6
2,716,064	-				-0.1
2,716,089	+				-0.6
2,716,169	-				-3.3
2,716,328	-		MIT1002_02432	0.11	-0.6
2,716,328	-		MIT1002_02432	0.11	+0.3
2,716,353	+		MIT1002_02432	0.12	+1.2
2,716,386	-		MIT1002_02432	0.14	+1.0
2,716,396	-		MIT1002_02432	0.15	-0.1
2,716,451	-		MIT1002_02432	0.19	-0.5
2,716,476	+		MIT1002_02432	0.20	+2.7
2,716,486	+		MIT1002_02432	0.21	+0.0
2,716,554	+		MIT1002_02432	0.25	+2.2
2,716,554	+		MIT1002_02432	0.25	+1.5
2,716,570	-		MIT1002_02432	0.26	+0.1
2,716,577	+		MIT1002_02432	0.27	-4.2
2,716,585	-		MIT1002_02432	0.27	+0.2
2,716,585	-		MIT1002_02432	0.27	+0.5
2,716,664	+		MIT1002_02432	0.32	+1.0
2,716,736	+		MIT1002_02432	0.37	+0.4
2,716,821	+		MIT1002_02432	0.43	+0.9
2,716,837	-		MIT1002_02432	0.44	-1.6
2,716,839	-		MIT1002_02432	0.44	+0.0
2,716,839	-		MIT1002_02432	0.44	-0.4
2,716,888	+		MIT1002_02432	0.47	+1.1
2,716,893	+		MIT1002_02432	0.47	+0.6
2,716,901	-		MIT1002_02432	0.48	-0.6
2,717,017	-		MIT1002_02432	0.55	+1.5
2,717,056	+		MIT1002_02432	0.58	+0.3
2,717,075	-		MIT1002_02432	0.59	+0.4
2,717,077	+		MIT1002_02432	0.59	+0.5
2,717,086	-		MIT1002_02432	0.60	+0.1
2,717,113	+		MIT1002_02432	0.61	-0.1
2,717,122	-		MIT1002_02432	0.62	+1.0
2,717,126	+		MIT1002_02432	0.62	-2.1
2,717,215	-		MIT1002_02432	0.68	-0.1
2,717,236	+		MIT1002_02432	0.69	-0.2
2,717,296	+		MIT1002_02432	0.73	+1.2
2,717,536	-		MIT1002_02432	0.89	-1.4
2,717,609	+				+0.6
2,717,620	+				-3.7
2,717,656	-				+0.5
2,717,663	+				+0.7
2,717,749	+				+1.1
2,717,749	+				-1.3
2,717,757	-				+0.4
2,717,757	-				+1.2
2,717,759	+				+0.1
2,717,759	+				+3.2
2,717,767	-				+0.9
2,717,778	+		MIT1002_02433	0.11	+1.9
2,717,816	+		MIT1002_02433	0.17	-0.7
2,718,241	+		MIT1002_02433	0.84	+2.0
2,718,249	-		MIT1002_02433	0.85	-1.3
2,718,262	-		MIT1002_02433	0.87	-2.3
2,718,296	-				+1.0
2,718,321	-				-1.0
2,718,385	+				-0.5
2,718,385	+				-0.7
2,718,390	+				+0.8
2,718,393	-				+0.6
2,718,393	-				+0.6
2,718,398	-				+1.1
2,718,464	+		MIT1002_02434	0.13	+0.8
2,718,487	+		MIT1002_02434	0.15	+0.0
2,718,495	-		MIT1002_02434	0.16	-3.1
2,718,495	-		MIT1002_02434	0.16	-0.3
2,718,495	-		MIT1002_02434	0.16	-1.6
2,718,642	+		MIT1002_02434	0.31	-0.1
2,718,650	-		MIT1002_02434	0.32	+0.1