Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02415

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,696,596	-		MIT1002_02414	0.64	+0.6
2,696,621	-		MIT1002_02414	0.69	+0.1
2,696,637	-		MIT1002_02414	0.71	+1.3
2,696,661	+		MIT1002_02414	0.75	+0.8
2,696,664	-		MIT1002_02414	0.76	-2.0
2,696,690	+		MIT1002_02414	0.80	-3.0
2,696,693	-		MIT1002_02414	0.81	+0.6
2,696,749	-		MIT1002_02414	0.90	-0.1
2,696,773	-				+1.4
2,696,839	-				+0.9
2,696,853	-				+0.5
2,696,983	-				-1.2
2,697,109	+				+2.3
2,697,140	-				+0.8
2,697,147	-				+1.5
2,697,393	+				-0.2
2,697,480	+				+1.1
2,697,505	-				-0.3
2,697,655	-		MIT1002_02415	0.18	+0.0
2,697,757	-		MIT1002_02415	0.29	+0.2
2,697,791	+		MIT1002_02415	0.32	+0.7
2,697,964	-		MIT1002_02415	0.50	-2.0
2,697,987	-		MIT1002_02415	0.52	-0.1
2,697,996	+		MIT1002_02415	0.53	-0.2
2,698,004	-		MIT1002_02415	0.54	-0.3
2,698,138	+		MIT1002_02415	0.67	-0.0
2,698,138	+		MIT1002_02415	0.67	+0.7
2,698,138	+		MIT1002_02415	0.67	-1.9
2,698,146	-		MIT1002_02415	0.68	-1.8
2,698,154	-		MIT1002_02415	0.69	-0.6
2,698,156	-		MIT1002_02415	0.69	+0.5
2,698,176	-		MIT1002_02415	0.71	-1.6
2,698,276	-		MIT1002_02415	0.81	-1.4
2,698,286	-		MIT1002_02415	0.82	-2.7
2,698,324	-		MIT1002_02415	0.86	-1.2
2,698,375	+				+1.8
2,698,380	+				+0.1
2,698,380	+				+0.4
2,698,383	-				-0.7
2,698,383	-				-0.2
2,698,388	-				+0.3
2,698,388	-				-3.7
2,698,388	-				-0.8
2,698,403	+				-0.3
2,698,404	+				-0.8
2,698,420	+				+0.3
2,698,420	+				-1.1
2,698,454	-				+0.8
2,698,461	+				-1.7
2,698,461	+				-1.1
2,698,484	+				-0.3
2,698,484	+				+1.4
2,698,492	-				+2.3
2,698,492	-				+0.3
2,698,494	+				+0.4
2,698,500	-				+0.3
2,698,502	-				-2.7
2,698,510	-				-0.3
2,698,588	+		MIT1002_02416	0.20	+0.1
2,698,588	+		MIT1002_02416	0.20	+0.3
2,698,596	-		MIT1002_02416	0.22	+0.2
2,698,627	+		MIT1002_02416	0.27	-1.1
2,698,627	+		MIT1002_02416	0.27	+1.2
2,698,627	+		MIT1002_02416	0.27	+0.9
2,698,635	-		MIT1002_02416	0.29	+1.2
2,698,636	+		MIT1002_02416	0.29	+0.3
2,698,682	+		MIT1002_02416	0.37	-0.3
2,698,682	+		MIT1002_02416	0.37	-0.9
2,698,690	-		MIT1002_02416	0.39	+0.4
2,698,690	-		MIT1002_02416	0.39	-2.6
2,698,692	+		MIT1002_02416	0.39	-0.7
2,698,692	+		MIT1002_02416	0.39	+2.3
2,698,692	+		MIT1002_02416	0.39	+2.0
2,698,695	-		MIT1002_02416	0.40	-0.6
2,698,762	+		MIT1002_02416	0.52	-0.7
2,698,782	+		MIT1002_02416	0.56	-1.9
2,698,782	+		MIT1002_02416	0.56	+0.3
2,698,787	+		MIT1002_02416	0.56	+1.7
2,698,787	+		MIT1002_02416	0.56	+0.0
2,698,797	+		MIT1002_02416	0.58	-1.2
2,698,844	-		MIT1002_02416	0.67	-1.9
2,698,889	-		MIT1002_02416	0.75	+0.5
2,698,930	+		MIT1002_02416	0.83	-0.0
2,698,971	+				-0.2
2,698,971	+				-1.4
2,698,979	-				-0.4
2,699,095	-				-3.0
2,699,108	-				-1.7
2,699,129	+				-0.0
2,699,153	+				-0.6
2,699,317	-				-2.2
2,699,347	+		MIT1002_02417	0.32	-0.3
2,699,359	+		MIT1002_02417	0.43	-0.1