Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02187

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,442,324	-				-1.2
2,442,395	+				-0.3
2,442,397	-				+0.2
2,442,411	-				+0.5
2,442,429	+				+0.6
2,442,554	+				-3.2
2,442,554	+				+0.6
2,442,595	+				-0.0
2,442,617	+				-2.2
2,442,758	+		MIT1002_02187	0.13	-0.3
2,442,788	+		MIT1002_02187	0.15	+0.4
2,442,788	+		MIT1002_02187	0.15	-0.4
2,442,795	+		MIT1002_02187	0.15	+0.2
2,442,796	-		MIT1002_02187	0.15	+0.6
2,442,859	+		MIT1002_02187	0.18	+0.4
2,442,867	-		MIT1002_02187	0.18	-1.8
2,442,867	-		MIT1002_02187	0.18	+0.6
2,442,905	+		MIT1002_02187	0.20	-0.2
2,442,925	+		MIT1002_02187	0.20	-2.9
2,442,961	+		MIT1002_02187	0.22	+1.4
2,442,961	+		MIT1002_02187	0.22	+0.6
2,442,969	-		MIT1002_02187	0.22	-0.1
2,442,971	+		MIT1002_02187	0.22	+0.2
2,442,972	+		MIT1002_02187	0.22	-1.8
2,443,024	-		MIT1002_02187	0.25	+0.3
2,443,083	-		MIT1002_02187	0.27	-1.6
2,443,143	-		MIT1002_02187	0.30	+0.4
2,443,152	+		MIT1002_02187	0.30	+0.5
2,443,173	+		MIT1002_02187	0.31	-2.0
2,443,202	-		MIT1002_02187	0.32	+1.9
2,443,212	-		MIT1002_02187	0.33	+0.1
2,443,338	+		MIT1002_02187	0.38	+1.1
2,443,365	-		MIT1002_02187	0.39	-0.8
2,443,502	-		MIT1002_02187	0.45	+1.4
2,443,502	-		MIT1002_02187	0.45	-0.6
2,443,528	-		MIT1002_02187	0.46	+0.8
2,443,536	-		MIT1002_02187	0.46	+0.3
2,443,548	-		MIT1002_02187	0.47	-2.2
2,443,640	+		MIT1002_02187	0.51	-0.5
2,443,642	+		MIT1002_02187	0.51	-0.8
2,443,650	-		MIT1002_02187	0.51	+1.7
2,443,702	-		MIT1002_02187	0.54	-3.3
2,443,716	+		MIT1002_02187	0.54	-1.8
2,443,858	+		MIT1002_02187	0.60	-0.4
2,443,881	+		MIT1002_02187	0.61	+2.3
2,444,044	-		MIT1002_02187	0.68	+1.2
2,444,056	-		MIT1002_02187	0.69	+1.0
2,444,075	-		MIT1002_02187	0.69	+1.1
2,444,180	-		MIT1002_02187	0.74	-0.0
2,444,213	+		MIT1002_02187	0.75	+0.7
2,444,249	+		MIT1002_02187	0.77	+0.5
2,444,286	+		MIT1002_02187	0.78	+0.7
2,444,385	+		MIT1002_02187	0.83	+1.4
2,444,456	-		MIT1002_02187	0.86	-1.6
2,444,474	+		MIT1002_02187	0.87	-0.4
2,444,474	+		MIT1002_02187	0.87	+1.7
2,444,482	-		MIT1002_02187	0.87	+0.1
2,444,526	+		MIT1002_02187	0.89	+0.4
2,444,541	+		MIT1002_02187	0.89	-1.1
2,444,662	+				+0.6
2,444,662	+				+0.7
2,444,726	+				+0.1
2,444,793	-				+2.1
2,444,827	+				-0.0
2,444,833	-				-0.4
2,444,835	-				-2.7
2,444,835	-				-1.3
2,444,835	-				-0.8
2,444,856	-				-1.4
2,444,856	-				+0.9
2,444,905	-				-0.5
2,445,018	-				+0.0
2,445,029	+		MIT1002_02188	0.11	-3.5
2,445,036	-		MIT1002_02188	0.14	-1.4
2,445,047	-		MIT1002_02188	0.18	-2.0
2,445,047	-		MIT1002_02188	0.18	-2.2
2,445,068	+		MIT1002_02188	0.25	-2.9
2,445,078	-		MIT1002_02188	0.28	-1.2
2,445,119	+		MIT1002_02188	0.43	-1.2
2,445,119	+		MIT1002_02188	0.43	-2.6
2,445,127	-		MIT1002_02188	0.45	-1.8
2,445,291	-				-3.9