Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02146

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,404,783	-		MIT1002_02144	0.77	-1.9
2,404,794	-		MIT1002_02144	0.79	+0.1
2,404,796	+		MIT1002_02144	0.79	+1.1
2,404,802	+		MIT1002_02144	0.80	-0.8
2,404,813	-		MIT1002_02144	0.82	+0.8
2,404,817	+		MIT1002_02144	0.83	-0.9
2,404,825	-		MIT1002_02144	0.84	-0.4
2,404,832	+		MIT1002_02144	0.85	-0.4
2,404,861	-		MIT1002_02144	0.90	-2.9
2,404,875	+				+1.0
2,404,875	+				+0.5
2,404,942	-				+1.8
2,404,985	-				+0.6
2,405,035	-		MIT1002_02145	0.13	+0.5
2,405,103	+		MIT1002_02145	0.23	+1.4
2,405,111	-		MIT1002_02145	0.24	-0.6
2,405,219	+		MIT1002_02145	0.39	-1.0
2,405,287	+		MIT1002_02145	0.48	+1.3
2,405,341	+		MIT1002_02145	0.56	-0.3
2,405,341	+		MIT1002_02145	0.56	-2.1
2,405,356	+		MIT1002_02145	0.58	-1.7
2,405,356	+		MIT1002_02145	0.58	-0.4
2,405,447	-		MIT1002_02145	0.70	+0.0
2,405,464	-		MIT1002_02145	0.73	-0.6
2,405,524	+		MIT1002_02145	0.81	-0.4
2,405,532	-		MIT1002_02145	0.82	+0.2
2,405,669	+				-0.4
2,405,672	-				+0.8
2,405,677	-				+0.6
2,405,677	-				+0.8
2,405,680	+				-0.6
2,405,735	-				-0.3
2,405,752	+				-1.4
2,405,760	-				-0.0
2,405,779	-				+0.2
2,405,816	+				-0.5
2,405,817	-				+0.3
2,405,817	-				-1.5
2,405,822	-				+0.8
2,405,937	-		MIT1002_02146	0.23	-0.6
2,405,937	-		MIT1002_02146	0.23	+0.1
2,405,970	-		MIT1002_02146	0.27	+1.1
2,406,002	+		MIT1002_02146	0.31	+1.4
2,406,035	+		MIT1002_02146	0.35	-0.1
2,406,054	-		MIT1002_02146	0.37	-0.3
2,406,108	-		MIT1002_02146	0.44	+1.2
2,406,131	+		MIT1002_02146	0.46	-0.2
2,406,247	-		MIT1002_02146	0.60	-1.4
2,406,329	+		MIT1002_02146	0.70	+1.1
2,406,339	-		MIT1002_02146	0.71	+1.1
2,406,339	-		MIT1002_02146	0.71	+0.1
2,406,384	-		MIT1002_02146	0.77	-1.9
2,406,394	+		MIT1002_02146	0.78	+1.7
2,406,394	+		MIT1002_02146	0.78	-0.1
2,406,400	+		MIT1002_02146	0.79	+1.0
2,406,402	-		MIT1002_02146	0.79	-1.6
2,406,411	+		MIT1002_02146	0.80	-0.6
2,406,445	+		MIT1002_02146	0.84	+0.6
2,406,452	+		MIT1002_02146	0.85	+0.1
2,406,553	+				+1.2
2,406,598	+				+0.0
2,406,613	+				-2.0
2,406,615	+				-1.5
2,406,673	+				-0.3
2,406,678	+				+0.8
2,406,701	+				+0.2
2,406,706	+				-0.3
2,406,709	-				+0.6
2,406,762	+		MIT1002_02147	0.13	+0.5
2,406,762	+		MIT1002_02147	0.13	-1.3
2,406,769	+		MIT1002_02147	0.14	-0.6
2,406,770	-		MIT1002_02147	0.14	+0.3
2,406,770	-		MIT1002_02147	0.14	+0.6
2,406,770	-		MIT1002_02147	0.14	+0.4
2,406,793	+		MIT1002_02147	0.19	-1.4
2,406,904	+		MIT1002_02147	0.41	+0.9
2,406,910	-		MIT1002_02147	0.43	+2.7
2,406,912	-		MIT1002_02147	0.43	+3.0
2,406,961	+		MIT1002_02147	0.53	+1.3
2,406,961	+		MIT1002_02147	0.53	-1.6
2,406,966	-		MIT1002_02147	0.54	+1.1
2,406,968	-		MIT1002_02147	0.54	-0.2
2,406,969	-		MIT1002_02147	0.54	+0.1
2,406,969	-		MIT1002_02147	0.54	-0.4
2,407,054	-		MIT1002_02147	0.71	+2.0
2,407,071	+		MIT1002_02147	0.75	-1.1
2,407,081	+		MIT1002_02147	0.77	-0.1
2,407,089	-		MIT1002_02147	0.79	+2.0
2,407,089	-		MIT1002_02147	0.79	+0.1
2,407,089	-		MIT1002_02147	0.79	-2.7
2,407,126	-		MIT1002_02147	0.86	+0.2
2,407,131	-		MIT1002_02147	0.87	-1.2
2,407,306	-				+0.8
2,407,364	-		MIT1002_02148	0.14	-1.8
2,407,376	+		MIT1002_02148	0.15	-2.2
2,407,395	+		MIT1002_02148	0.18	-0.4
2,407,395	+		MIT1002_02148	0.18	+0.1
2,407,398	-		MIT1002_02148	0.18	-1.6
2,407,423	+		MIT1002_02148	0.22	-0.6