Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02067

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,327,022	-		MIT1002_02065	0.29	+0.6
2,327,093	+		MIT1002_02065	0.37	-0.5
2,327,131	+		MIT1002_02065	0.42	+0.1
2,327,139	-		MIT1002_02065	0.43	-0.1
2,327,173	-		MIT1002_02065	0.47	-0.9
2,327,191	+		MIT1002_02065	0.49	+0.2
2,327,191	+		MIT1002_02065	0.49	-1.7
2,327,191	+		MIT1002_02065	0.49	+0.3
2,327,191	+		MIT1002_02065	0.49	+0.9
2,327,199	-		MIT1002_02065	0.50	-0.5
2,327,224	-		MIT1002_02065	0.53	-0.0
2,327,285	-		MIT1002_02065	0.60	+2.0
2,327,361	+		MIT1002_02065	0.69	+0.9
2,327,526	-		MIT1002_02065	0.88	+0.9
2,327,656	+				-0.2
2,327,770	+		MIT1002_02066	0.32	-0.8
2,327,778	-		MIT1002_02066	0.35	+0.1
2,327,906	-		MIT1002_02066	0.73	-3.1
2,327,932	-		MIT1002_02066	0.80	-2.3
2,327,958	+		MIT1002_02066	0.88	+1.2
2,327,962	+		MIT1002_02066	0.89	-0.5
2,327,973	+				-0.6
2,327,981	-				-0.2
2,327,982	+				-0.4
2,327,982	+				+0.1
2,327,990	-				+1.3
2,328,094	+		MIT1002_02067	0.41	+1.9
2,328,105	-		MIT1002_02067	0.45	-0.2
2,328,128	+		MIT1002_02067	0.54	+0.3
2,328,128	+		MIT1002_02067	0.54	+0.2
2,328,128	+		MIT1002_02067	0.54	+0.9
2,328,128	+		MIT1002_02067	0.54	+0.1
2,328,136	-		MIT1002_02067	0.57	+0.2
2,328,136	-		MIT1002_02067	0.57	+0.4
2,328,136	-		MIT1002_02067	0.57	+1.3
2,328,136	-		MIT1002_02067	0.57	-1.5
2,328,138	-		MIT1002_02067	0.58	+1.7
2,328,176	+		MIT1002_02067	0.72	+0.3
2,328,268	+				-1.9
2,328,268	+				-2.2
2,328,287	+				+0.9
2,328,295	-				-2.3
2,328,336	+				-0.1
2,328,337	-				-0.5
2,328,360	+				-1.0
2,328,376	+				+0.0
2,328,379	-				-0.4
2,328,384	-				-0.7
2,328,384	-				-0.5
2,328,403	+		MIT1002_02068	0.10	-2.8
2,328,403	+		MIT1002_02068	0.10	-1.7
2,328,411	-		MIT1002_02068	0.11	+1.3
2,328,421	+		MIT1002_02068	0.11	-0.1
2,328,650	+		MIT1002_02068	0.26	-0.6
2,328,668	-		MIT1002_02068	0.27	-3.4
2,328,727	+		MIT1002_02068	0.31	+0.5
2,328,785	+		MIT1002_02068	0.35	-1.9
2,328,791	-		MIT1002_02068	0.35	-0.5
2,328,793	-		MIT1002_02068	0.36	+0.2
2,328,811	+		MIT1002_02068	0.37	-2.1
2,328,812	-		MIT1002_02068	0.37	-1.1
2,328,846	-		MIT1002_02068	0.39	+1.3
2,328,951	-		MIT1002_02068	0.46	-0.1
2,328,963	+		MIT1002_02068	0.47	+0.8
2,329,005	-		MIT1002_02068	0.49	+1.2
2,329,022	+		MIT1002_02068	0.50	-2.0
2,329,024	+		MIT1002_02068	0.51	+1.5
2,329,030	-		MIT1002_02068	0.51	+0.7
2,329,067	+		MIT1002_02068	0.53	-0.5
2,329,126	+		MIT1002_02068	0.57	+2.4
2,329,153	-		MIT1002_02068	0.59	+0.4
2,329,214	+		MIT1002_02068	0.63	+0.1
2,329,221	-		MIT1002_02068	0.63	-0.4