Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01972

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,205,028	-		MIT1002_01970	0.65	-0.7
2,205,028	-		MIT1002_01970	0.65	+1.0
2,205,052	-		MIT1002_01970	0.69	-2.3
2,205,059	-		MIT1002_01970	0.70	-0.4
2,205,085	+		MIT1002_01970	0.74	+0.4
2,205,208	-				-0.1
2,205,273	+				-0.4
2,205,457	-				+1.9
2,205,600	+		MIT1002_01971	0.51	-0.9
2,205,643	-		MIT1002_01971	0.63	-1.1
2,205,659	+		MIT1002_01971	0.68	+1.3
2,205,659	+		MIT1002_01971	0.68	-0.0
2,205,659	+		MIT1002_01971	0.68	-0.7
2,205,659	+		MIT1002_01971	0.68	+0.6
2,205,667	-		MIT1002_01971	0.70	+0.9
2,205,667	-		MIT1002_01971	0.70	-0.3
2,205,667	-		MIT1002_01971	0.70	-1.1
2,205,667	-		MIT1002_01971	0.70	-3.2
2,205,669	+		MIT1002_01971	0.71	-0.8
2,205,677	-		MIT1002_01971	0.73	-1.1
2,205,836	-				+0.8
2,206,045	+				+0.2
2,206,089	+		MIT1002_01972	0.11	-1.8
2,206,129	+		MIT1002_01972	0.17	+1.2
2,206,146	+		MIT1002_01972	0.19	+0.3
2,206,183	+		MIT1002_01972	0.24	-0.8
2,206,308	+		MIT1002_01972	0.40	+1.0
2,206,333	+		MIT1002_01972	0.43	+3.4
2,206,350	+		MIT1002_01972	0.46	+0.3
2,206,357	-		MIT1002_01972	0.47	-0.5
2,206,358	-		MIT1002_01972	0.47	+1.0
2,206,384	+		MIT1002_01972	0.50	-0.2
2,206,384	+		MIT1002_01972	0.50	+0.7
2,206,443	+		MIT1002_01972	0.58	+0.1
2,206,451	+		MIT1002_01972	0.59	+0.9
2,206,482	-		MIT1002_01972	0.63	-1.8
2,206,537	-		MIT1002_01972	0.70	+0.1
2,206,537	-		MIT1002_01972	0.70	-0.3
2,206,542	+		MIT1002_01972	0.71	+1.4
2,206,564	+		MIT1002_01972	0.74	-2.0
2,206,572	-		MIT1002_01972	0.75	-3.6
2,206,614	+		MIT1002_01972	0.80	+0.1
2,206,625	-		MIT1002_01972	0.82	+0.2
2,206,671	+		MIT1002_01972	0.88	-0.4
2,206,679	-		MIT1002_01972	0.89	-3.5
2,206,693	+				-1.3
2,206,693	+				-0.7
2,206,703	+				+0.9
2,206,705	+				+1.5
2,206,773	-				-0.2
2,206,888	-		MIT1002_01973	0.15	+0.4
2,206,935	+		MIT1002_01973	0.21	-0.3
2,206,938	-		MIT1002_01973	0.21	+0.0
2,206,943	-		MIT1002_01973	0.22	+0.9
2,207,012	+		MIT1002_01973	0.31	-1.2
2,207,021	-		MIT1002_01973	0.32	-2.7
2,207,087	-		MIT1002_01973	0.41	-0.8
2,207,115	+		MIT1002_01973	0.45	+1.6
2,207,115	+		MIT1002_01973	0.45	+0.4
2,207,115	+		MIT1002_01973	0.45	-0.8
2,207,123	-		MIT1002_01973	0.46	-0.2
2,207,123	-		MIT1002_01973	0.46	+1.3
2,207,123	-		MIT1002_01973	0.46	-1.5
2,207,123	-		MIT1002_01973	0.46	+0.2
2,207,133	-		MIT1002_01973	0.47	+1.0
2,207,138	+		MIT1002_01973	0.48	+0.1
2,207,138	+		MIT1002_01973	0.48	-1.5
2,207,185	+		MIT1002_01973	0.54	+2.6
2,207,190	+		MIT1002_01973	0.55	-0.1
2,207,193	-		MIT1002_01973	0.55	+0.7
2,207,336	-		MIT1002_01973	0.75	-0.8
2,207,412	+		MIT1002_01973	0.85	+0.3
2,207,412	-		MIT1002_01973	0.85	+1.6
2,207,471	+				-3.0
2,207,477	+				+0.5
2,207,570	+				-1.1
2,207,580	-				+0.0
2,207,580	-				-0.8
2,207,580	-				-0.8
2,207,595	+				-2.2
2,207,597	+				+3.6
2,207,599	-				-1.1
2,207,616	+				-1.1
2,207,679	+				-0.2
2,207,687	-				+1.7
2,207,734	+		MIT1002_01974	0.11	-0.5
2,207,759	+		MIT1002_01974	0.13	-0.7