Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01918

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,124,677	+		MIT1002_01916	0.64	+0.5
2,124,677	+		MIT1002_01916	0.64	+0.6
2,124,685	-		MIT1002_01916	0.65	-1.4
2,124,685	-		MIT1002_01916	0.65	+0.7
2,124,685	-		MIT1002_01916	0.65	-2.2
2,124,733	+		MIT1002_01916	0.73	-1.8
2,124,740	+		MIT1002_01916	0.74	-2.0
2,124,741	-		MIT1002_01916	0.74	-0.2
2,124,749	-		MIT1002_01916	0.75	-0.6
2,124,779	+		MIT1002_01916	0.80	+0.0
2,124,787	-		MIT1002_01916	0.82	-0.4
2,124,919	+				-1.9
2,125,174	+		MIT1002_01917	0.41	-0.3
2,125,200	+		MIT1002_01917	0.45	-1.7
2,125,273	-		MIT1002_01917	0.56	-2.1
2,125,350	+		MIT1002_01917	0.67	-3.2
2,125,350	+		MIT1002_01917	0.67	-2.3
2,125,358	-		MIT1002_01917	0.69	-2.7
2,125,519	+				-0.4
2,125,521	+				-0.3
2,125,681	+				-0.2
2,125,759	-		MIT1002_01918	0.24	-2.2
2,125,823	+		MIT1002_01918	0.40	-3.6
2,125,842	-		MIT1002_01918	0.44	-2.0
2,125,880	+		MIT1002_01918	0.54	+1.0
2,125,958	+		MIT1002_01918	0.73	+0.1
2,126,085	-				+1.5
2,126,163	-				+0.6
2,126,163	-				-1.7
2,126,193	+				+0.0
2,126,338	-		MIT1002_01919	0.15	+0.4
2,126,367	+		MIT1002_01919	0.18	+0.3
2,126,372	+		MIT1002_01919	0.19	+0.4
2,126,375	-		MIT1002_01919	0.19	+0.9
2,126,385	-		MIT1002_01919	0.20	+1.2
2,126,396	+		MIT1002_01919	0.21	-1.1
2,126,396	+		MIT1002_01919	0.21	+2.1
2,126,411	+		MIT1002_01919	0.23	-2.9
2,126,453	-		MIT1002_01919	0.28	-2.3
2,126,463	-		MIT1002_01919	0.29	+1.0
2,126,487	-		MIT1002_01919	0.31	-0.4
2,126,531	+		MIT1002_01919	0.36	-0.4
2,126,566	+		MIT1002_01919	0.40	+0.2
2,126,644	+		MIT1002_01919	0.49	+1.9
2,126,710	-		MIT1002_01919	0.56	+1.9
2,126,726	+		MIT1002_01919	0.58	-2.1
2,126,726	+		MIT1002_01919	0.58	+0.2
2,126,734	-		MIT1002_01919	0.59	-1.3
2,126,734	-		MIT1002_01919	0.59	+0.3
2,126,734	-		MIT1002_01919	0.59	-1.1
2,126,787	+		MIT1002_01919	0.65	+0.0
2,126,803	+		MIT1002_01919	0.66	-1.0
2,126,815	-		MIT1002_01919	0.68	-0.5
2,126,820	-		MIT1002_01919	0.68	-0.3
2,126,872	-		MIT1002_01919	0.74	-0.1
2,126,971	+		MIT1002_01919	0.85	-1.6
2,126,984	-		MIT1002_01919	0.86	+0.9
2,127,032	+				-0.2