Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01801

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
2,005,383	-		MIT1002_01800	0.65	+0.6
2,005,412	+		MIT1002_01800	0.67	+0.3
2,005,420	-		MIT1002_01800	0.67	-0.8
2,005,441	+		MIT1002_01800	0.68	+0.3
2,005,441	-		MIT1002_01800	0.68	+2.9
2,005,441	-		MIT1002_01800	0.68	-1.5
2,005,502	-		MIT1002_01800	0.71	-0.4
2,005,540	+		MIT1002_01800	0.73	-0.4
2,005,547	-		MIT1002_01800	0.73	+1.3
2,005,548	-		MIT1002_01800	0.73	+0.4
2,005,607	-		MIT1002_01800	0.76	+0.5
2,005,661	+		MIT1002_01800	0.78	+0.9
2,005,668	+		MIT1002_01800	0.78	+1.4
2,005,669	+		MIT1002_01800	0.78	+1.8
2,005,681	+		MIT1002_01800	0.79	+0.6
2,005,681	+		MIT1002_01800	0.79	+1.5
2,005,709	+		MIT1002_01800	0.80	+0.5
2,005,709	+		MIT1002_01800	0.80	-0.6
2,005,709	+		MIT1002_01800	0.80	+1.2
2,005,709	+		MIT1002_01800	0.80	+2.4
2,005,717	-		MIT1002_01800	0.81	+0.7
2,005,728	-		MIT1002_01800	0.81	-0.1
2,005,816	+		MIT1002_01800	0.85	+1.4
2,005,868	+		MIT1002_01800	0.87	-0.1
2,005,907	-		MIT1002_01800	0.89	-0.6
2,005,925	-				-0.2
2,005,925	-				-1.0
2,005,925	-				-0.6
2,005,951	+				-1.7
2,005,952	-				-1.0
2,005,997	+				-1.8
2,006,005	-				-0.5
2,006,011	+				+1.5
2,006,011	+				+0.6
2,006,014	-				-1.8
2,006,019	-				+1.6
2,006,118	-				-0.8
2,006,123	-				+0.7
2,006,147	+				+0.9
2,006,191	+				-0.0
2,006,244	+				-2.8
2,006,259	+				+0.0
2,006,275	+				-0.7
2,006,369	-				+0.6
2,006,464	-		MIT1002_01801	0.11	-0.5
2,006,529	-		MIT1002_01801	0.17	-2.1
2,006,559	+		MIT1002_01801	0.20	+1.2
2,006,579	+		MIT1002_01801	0.22	-0.1
2,006,579	-		MIT1002_01801	0.22	-1.8
2,006,581	+		MIT1002_01801	0.22	+0.7
2,006,581	+		MIT1002_01801	0.22	-2.2
2,006,589	-		MIT1002_01801	0.23	-0.1
2,006,589	-		MIT1002_01801	0.23	-1.1
2,006,748	-		MIT1002_01801	0.37	+0.9
2,006,763	+		MIT1002_01801	0.38	+1.1
2,006,771	-		MIT1002_01801	0.39	+0.5
2,006,819	-		MIT1002_01801	0.43	+0.5
2,006,870	+		MIT1002_01801	0.48	+0.5
2,006,880	+		MIT1002_01801	0.49	-0.2
2,006,889	+		MIT1002_01801	0.50	-0.4
2,006,889	+		MIT1002_01801	0.50	+0.2
2,006,903	-		MIT1002_01801	0.51	+0.2
2,007,020	+		MIT1002_01801	0.62	+1.9
2,007,080	-		MIT1002_01801	0.67	+0.9
2,007,159	+		MIT1002_01801	0.74	-1.3
2,007,178	-		MIT1002_01801	0.76	+0.2
2,007,207	-		MIT1002_01801	0.79	+0.5
2,007,247	+		MIT1002_01801	0.82	-1.9
2,007,257	+		MIT1002_01801	0.83	+0.4
2,007,296	+		MIT1002_01801	0.87	+0.8
2,007,299	-		MIT1002_01801	0.87	+1.4
2,007,327	+		MIT1002_01801	0.90	+1.2
2,007,337	+				+0.7
2,007,481	-				+0.0
2,007,485	+				-0.4
2,007,742	-		MIT1002_01802	0.21	-2.9
2,007,830	+		MIT1002_01802	0.27	-0.0
2,007,837	+		MIT1002_01802	0.28	+1.7
2,007,860	-		MIT1002_01802	0.29	-0.7
2,007,898	-		MIT1002_01802	0.32	-0.1
2,007,902	+		MIT1002_01802	0.32	+0.9
2,008,145	+		MIT1002_01802	0.49	-2.6
2,008,205	-		MIT1002_01802	0.53	+1.8
2,008,210	-		MIT1002_01802	0.53	+1.0
2,008,226	+		MIT1002_01802	0.55	+1.6
2,008,282	+		MIT1002_01802	0.58	-0.1
2,008,431	+		MIT1002_01802	0.69	+0.6