Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01748

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,940,450	-		MIT1002_01746	0.87	+0.5
1,940,460	+				+1.9
1,940,590	-				-0.1
1,940,636	+				+0.4
1,940,655	+				+1.7
1,940,676	+				+0.2
1,940,813	-				+1.8
1,940,813	-				+0.8
1,940,818	-				-0.5
1,940,820	+				-1.3
1,940,823	-				+0.5
1,940,855	+				+0.4
1,940,926	-				-1.1
1,941,014	+		MIT1002_01747	0.22	+3.6
1,941,035	+		MIT1002_01747	0.30	+1.2
1,941,040	+		MIT1002_01747	0.32	+0.3
1,941,040	+		MIT1002_01747	0.32	-1.2
1,941,043	-		MIT1002_01747	0.33	+1.3
1,941,055	-		MIT1002_01747	0.37	+1.3
1,941,057	+		MIT1002_01747	0.38	-1.8
1,941,075	+		MIT1002_01747	0.45	-0.6
1,941,075	+		MIT1002_01747	0.45	+1.1
1,941,083	-		MIT1002_01747	0.47	+0.0
1,941,083	-		MIT1002_01747	0.47	+1.3
1,941,154	+		MIT1002_01747	0.73	+0.9
1,941,162	-		MIT1002_01747	0.76	-0.8
1,941,186	-		MIT1002_01747	0.85	+0.2
1,941,480	-				-1.7
1,941,480	-				+1.3
1,941,482	-				+0.6
1,941,520	+				-1.0
1,941,551	+		MIT1002_01748	0.14	-1.8
1,941,595	+		MIT1002_01748	0.19	+0.7
1,941,595	+		MIT1002_01748	0.19	-0.1
1,941,595	+		MIT1002_01748	0.19	+0.5
1,941,603	-		MIT1002_01748	0.21	-1.0
1,941,613	-		MIT1002_01748	0.22	-0.4
1,941,680	+		MIT1002_01748	0.31	+1.0
1,941,691	-		MIT1002_01748	0.32	-0.0
1,941,747	+		MIT1002_01748	0.39	+0.5
1,941,769	-		MIT1002_01748	0.42	+2.1
1,941,845	+		MIT1002_01748	0.52	+1.0
1,941,853	-		MIT1002_01748	0.53	+1.7
1,941,904	-		MIT1002_01748	0.60	+0.9
1,941,917	+		MIT1002_01748	0.62	+0.3
1,941,917	+		MIT1002_01748	0.62	+0.8
1,941,923	-		MIT1002_01748	0.62	-0.2
1,941,923	-		MIT1002_01748	0.62	-0.7
1,941,923	-		MIT1002_01748	0.62	-0.4
1,941,923	-		MIT1002_01748	0.62	-0.6
1,941,953	-		MIT1002_01748	0.66	+1.4
1,941,986	-		MIT1002_01748	0.71	+0.2
1,942,145	+				+0.4
1,942,220	-				-1.1
1,942,351	+		MIT1002_01749	0.10	+0.9
1,942,351	+		MIT1002_01749	0.10	+1.1
1,942,351	+		MIT1002_01749	0.10	-4.6
1,942,351	+		MIT1002_01749	0.10	-0.1
1,942,351	+		MIT1002_01749	0.10	+0.1
1,942,351	+		MIT1002_01749	0.10	+1.4
1,942,351	+		MIT1002_01749	0.10	+0.5
1,942,351	+		MIT1002_01749	0.10	+2.5
1,942,358	-		MIT1002_01749	0.11	-0.5
1,942,358	-		MIT1002_01749	0.11	+0.4
1,942,359	-		MIT1002_01749	0.11	+0.1
1,942,359	-		MIT1002_01749	0.11	+0.3
1,942,359	-		MIT1002_01749	0.11	-1.1
1,942,359	-		MIT1002_01749	0.11	+0.7
1,942,359	-		MIT1002_01749	0.11	+0.3
1,942,359	-		MIT1002_01749	0.11	+0.3
1,942,359	-		MIT1002_01749	0.11	-0.1
1,942,359	-		MIT1002_01749	0.11	-1.8
1,942,426	-		MIT1002_01749	0.19	+0.4
1,942,437	-		MIT1002_01749	0.20	-0.5
1,942,492	-		MIT1002_01749	0.26	-1.2
1,942,550	+		MIT1002_01749	0.32	-0.0
1,942,603	+		MIT1002_01749	0.38	+0.6
1,942,611	-		MIT1002_01749	0.39	+0.4
1,942,611	-		MIT1002_01749	0.39	-1.6
1,942,635	+		MIT1002_01749	0.42	-0.1
1,942,689	+		MIT1002_01749	0.47	-0.4
1,942,712	+		MIT1002_01749	0.50	+2.3
1,942,717	+		MIT1002_01749	0.50	+0.8
1,942,720	-		MIT1002_01749	0.51	-0.0
1,942,727	+		MIT1002_01749	0.52	-0.0
1,942,737	+		MIT1002_01749	0.53	-1.0
1,942,745	-		MIT1002_01749	0.54	-2.9
1,942,874	+		MIT1002_01749	0.68	+0.1
1,942,988	+		MIT1002_01749	0.80	-0.0
1,943,020	-		MIT1002_01749	0.84	+0.5
1,943,089	+				+1.3
1,943,153	+				-0.5
1,943,153	+				+0.0
1,943,161	-				+1.8