Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01717

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,906,424	-		MIT1002_01715	0.59	+1.5
1,906,428	+		MIT1002_01715	0.60	-0.5
1,906,460	+		MIT1002_01715	0.65	+1.6
1,906,468	-		MIT1002_01715	0.66	+0.1
1,906,518	+		MIT1002_01715	0.73	+0.5
1,906,541	+		MIT1002_01715	0.77	+1.2
1,906,541	+		MIT1002_01715	0.77	+2.3
1,906,541	+		MIT1002_01715	0.77	+1.2
1,906,549	-		MIT1002_01715	0.78	+0.5
1,906,553	+		MIT1002_01715	0.78	-0.6
1,906,577	+		MIT1002_01715	0.82	-0.9
1,906,752	-				+0.3
1,906,764	-				+2.2
1,906,764	-				+1.2
1,906,769	-				-0.9
1,906,769	-				-0.3
1,906,769	-				+1.2
1,906,769	-				-0.2
1,906,919	-		MIT1002_01716	0.36	+0.7
1,906,924	+		MIT1002_01716	0.37	+1.4
1,906,962	+		MIT1002_01716	0.46	+0.6
1,907,110	-		MIT1002_01716	0.78	-0.0
1,907,200	+				-0.1
1,907,221	+				+1.5
1,907,227	-				+0.6
1,907,233	+				-0.1
1,907,236	-				-0.3
1,907,365	+				-0.2
1,907,371	+				-0.7
1,907,409	+				+0.1
1,907,409	+				-0.6
1,907,418	+				-2.5
1,907,461	+				-0.4
1,907,469	-		MIT1002_01717	0.11	-1.1
1,907,469	-		MIT1002_01717	0.11	+0.2
1,907,469	-		MIT1002_01717	0.11	+0.1
1,907,471	+		MIT1002_01717	0.11	-1.1
1,907,623	+		MIT1002_01717	0.28	-0.1
1,907,628	+		MIT1002_01717	0.28	+2.6
1,907,631	-		MIT1002_01717	0.29	+0.5
1,907,631	-		MIT1002_01717	0.29	-2.1
1,907,631	-		MIT1002_01717	0.29	+1.7
1,907,631	-		MIT1002_01717	0.29	-1.1
1,907,643	-		MIT1002_01717	0.30	-0.1
1,907,643	-		MIT1002_01717	0.30	+1.2
1,907,707	-		MIT1002_01717	0.37	+0.1
1,907,715	+		MIT1002_01717	0.38	-0.5
1,907,757	-		MIT1002_01717	0.43	+0.4
1,907,764	+		MIT1002_01717	0.44	+0.0
1,907,828	-		MIT1002_01717	0.51	-0.4
1,907,840	-		MIT1002_01717	0.52	+2.0
1,907,843	+		MIT1002_01717	0.53	-1.6
1,907,851	-		MIT1002_01717	0.53	-1.8
1,907,923	+		MIT1002_01717	0.62	+2.0
1,907,954	+		MIT1002_01717	0.65	+0.0
1,907,982	-		MIT1002_01717	0.68	+0.4
1,908,025	-		MIT1002_01717	0.73	+1.3
1,908,093	-		MIT1002_01717	0.81	+1.5
1,908,168	+		MIT1002_01717	0.89	-0.3
1,908,168	+		MIT1002_01717	0.89	-0.5
1,908,176	-		MIT1002_01717	0.90	-2.1
1,908,176	-		MIT1002_01717	0.90	+1.1
1,908,176	-		MIT1002_01717	0.90	+0.0
1,908,176	-		MIT1002_01717	0.90	-1.1
1,908,196	+				+1.5
1,908,230	-				+0.9
1,908,264	+				+0.9
1,908,278	+				+1.0
1,908,278	+				+0.2
1,908,278	+				+1.3
1,908,278	+				-2.9
1,908,278	+				+1.4
1,908,286	-				-1.0
1,908,286	-				-1.1
1,908,286	-				+1.7
1,908,307	-				+0.7
1,908,336	+				-0.0
1,908,337	+				+0.4
1,908,344	-				-1.7
1,908,369	+				-0.8
1,908,454	+				+1.6
1,908,457	-				+0.4
1,908,467	-				+0.2
1,908,520	-				+0.5
1,908,580	+		MIT1002_01718	0.19	-0.8
1,908,757	+		MIT1002_01718	0.57	-0.2
1,908,772	+		MIT1002_01718	0.61	+1.2
1,908,780	-		MIT1002_01718	0.62	+0.4
1,908,889	+		MIT1002_01718	0.86	-0.8
1,908,896	+		MIT1002_01718	0.87	+0.0
1,908,941	+				+0.1
1,908,947	-				+0.9
1,908,949	+				-0.6
1,908,949	-				-0.7
1,908,954	+				+1.0
1,908,957	-				-0.5
1,908,962	-				+0.9
1,909,047	-				-0.9
1,909,051	+				-0.8
1,909,072	-				+1.0
1,909,080	-				+0.4
1,909,138	-				-2.0
1,909,171	+		MIT1002_01719	0.10	+0.8
1,909,172	-		MIT1002_01719	0.10	-0.2
1,909,243	-		MIT1002_01719	0.19	-0.9