Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01667

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,841,551	+		MIT1002_01666	0.50	-2.9
1,841,591	-		MIT1002_01666	0.52	-1.3
1,841,689	-		MIT1002_01666	0.57	-2.1
1,841,752	-		MIT1002_01666	0.60	+0.1
1,841,854	+		MIT1002_01666	0.65	-0.1
1,841,859	+		MIT1002_01666	0.66	-1.0
1,841,883	+		MIT1002_01666	0.67	-3.1
1,841,961	+		MIT1002_01666	0.71	-0.5
1,841,961	+		MIT1002_01666	0.71	-2.0
1,841,969	-		MIT1002_01666	0.71	+1.0
1,841,969	-		MIT1002_01666	0.71	-2.4
1,842,054	-		MIT1002_01666	0.75	-0.9
1,842,077	+		MIT1002_01666	0.76	-1.8
1,842,212	-		MIT1002_01666	0.83	-2.2
1,842,213	-		MIT1002_01666	0.83	-0.6
1,842,312	-		MIT1002_01666	0.88	-0.8
1,842,470	+				+1.1
1,842,479	+				-2.0
1,842,521	-				-0.0
1,842,566	-				-0.3
1,842,581	-				-0.8
1,842,613	-				-1.5
1,842,624	+		MIT1002_01667	0.10	-0.0
1,842,632	-		MIT1002_01667	0.11	-0.3
1,842,677	-		MIT1002_01667	0.17	-1.6
1,842,770	+		MIT1002_01667	0.28	+0.7
1,842,817	+		MIT1002_01667	0.34	-2.6
1,842,825	-		MIT1002_01667	0.35	-0.7
1,842,893	-		MIT1002_01667	0.44	+0.4
1,842,908	-		MIT1002_01667	0.46	-1.6
1,842,909	-		MIT1002_01667	0.46	-0.3
1,843,007	+		MIT1002_01667	0.58	-0.4
1,843,007	+		MIT1002_01667	0.58	+2.2
1,843,111	+		MIT1002_01667	0.71	-1.6
1,843,139	+		MIT1002_01667	0.75	-1.0
1,843,263	+				-0.4
1,843,401	-				-3.0
1,843,403	-				-1.1
1,843,414	-				-0.4
1,843,447	+				-0.7
1,843,455	+				+0.6
1,843,463	+				-0.8
1,843,463	+				-1.3
1,843,471	-				-1.4
1,843,471	-				-3.2
1,843,471	-				-2.2
1,843,478	-				-2.1
1,843,558	+		MIT1002_01668	0.13	-1.4
1,843,575	+		MIT1002_01668	0.14	-1.0
1,843,586	+		MIT1002_01668	0.14	-0.5
1,843,586	+		MIT1002_01668	0.14	-0.2
1,843,586	+		MIT1002_01668	0.14	-1.3
1,843,586	+		MIT1002_01668	0.14	-1.6
1,843,586	+		MIT1002_01668	0.14	-2.7
1,843,586	+		MIT1002_01668	0.14	+1.6
1,843,586	+		MIT1002_01668	0.14	+1.1
1,843,586	+		MIT1002_01668	0.14	-3.9
1,843,586	+		MIT1002_01668	0.14	-0.6
1,843,586	+		MIT1002_01668	0.14	-0.8
1,843,586	+		MIT1002_01668	0.14	-0.6
1,843,594	-		MIT1002_01668	0.15	-0.7
1,843,594	-		MIT1002_01668	0.15	-4.1
1,843,594	-		MIT1002_01668	0.15	-1.5
1,843,594	-		MIT1002_01668	0.15	-0.1
1,843,594	-		MIT1002_01668	0.15	-0.6
1,843,594	-		MIT1002_01668	0.15	-1.7
1,843,625	-		MIT1002_01668	0.17	-0.2
1,843,682	+		MIT1002_01668	0.20	-1.8
1,843,746	-		MIT1002_01668	0.24	+0.2
1,843,766	-		MIT1002_01668	0.26	-0.2
1,843,773	+		MIT1002_01668	0.26	-1.5
1,843,821	+		MIT1002_01668	0.29	-1.8
1,843,829	-		MIT1002_01668	0.30	-3.8
1,843,871	+		MIT1002_01668	0.32	-1.8
1,843,902	-		MIT1002_01668	0.34	-0.9
1,844,000	+		MIT1002_01668	0.40	-1.1
1,844,019	-		MIT1002_01668	0.41	-2.3
1,844,115	-		MIT1002_01668	0.47	-0.0
1,844,165	+		MIT1002_01668	0.50	-2.1
1,844,173	-		MIT1002_01668	0.51	-2.9
1,844,178	-		MIT1002_01668	0.51	+0.2
1,844,254	-		MIT1002_01668	0.56	+1.3
1,844,262	+		MIT1002_01668	0.56	-2.3
1,844,271	+		MIT1002_01668	0.57	-1.1