Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01645

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,815,275	-		MIT1002_01643	0.71	+0.1
1,815,324	-		MIT1002_01643	0.75	-0.8
1,815,332	+		MIT1002_01643	0.76	-0.2
1,815,355	-		MIT1002_01643	0.78	-4.5
1,815,365	-		MIT1002_01643	0.79	+0.2
1,815,406	+		MIT1002_01643	0.83	-4.0
1,815,412	+		MIT1002_01643	0.84	+0.3
1,815,419	-		MIT1002_01643	0.85	+0.5
1,815,427	+		MIT1002_01643	0.85	-1.0
1,815,442	+		MIT1002_01643	0.87	+0.5
1,815,442	+		MIT1002_01643	0.87	+0.3
1,815,450	-		MIT1002_01643	0.88	+1.5
1,815,541	+				-0.3
1,815,671	+				-0.7
1,815,717	+		MIT1002_01644	0.18	-1.1
1,815,725	-		MIT1002_01644	0.20	+0.7
1,815,735	-		MIT1002_01644	0.22	+0.2
1,815,867	+		MIT1002_01644	0.47	-1.4
1,815,875	-		MIT1002_01644	0.49	-2.2
1,815,896	+		MIT1002_01644	0.53	-0.0
1,815,906	+		MIT1002_01644	0.55	-1.1
1,815,914	-		MIT1002_01644	0.57	-0.1
1,816,042	+		MIT1002_01644	0.81	+0.6
1,816,050	-		MIT1002_01644	0.83	-1.0
1,816,050	-		MIT1002_01644	0.83	+0.6
1,816,100	+				+0.1
1,816,116	-				-0.5
1,816,211	-				-0.5
1,816,231	+				-1.7
1,816,266	+				-1.3
1,816,307	+				-2.1
1,816,315	-				-0.5
1,816,368	+				-2.1
1,816,371	-				-2.3
1,816,562	+		MIT1002_01645	0.20	-0.4
1,816,617	-		MIT1002_01645	0.23	-0.7
1,816,683	+		MIT1002_01645	0.26	-2.1
1,816,691	-		MIT1002_01645	0.27	-1.9
1,816,739	+		MIT1002_01645	0.30	-1.5
1,816,908	+		MIT1002_01645	0.39	-0.9
1,816,908	+		MIT1002_01645	0.39	-1.1
1,816,916	-		MIT1002_01645	0.40	-2.3
1,816,916	-		MIT1002_01645	0.40	+1.5
1,816,916	-		MIT1002_01645	0.40	-1.1
1,816,929	+		MIT1002_01645	0.41	-2.3
1,816,929	+		MIT1002_01645	0.41	-0.9
1,817,035	+		MIT1002_01645	0.47	-1.5
1,817,180	-		MIT1002_01645	0.55	-1.1
1,817,243	-		MIT1002_01645	0.58	+0.0
1,817,249	+		MIT1002_01645	0.59	-1.3
1,817,250	-		MIT1002_01645	0.59	-1.3
1,817,262	-		MIT1002_01645	0.60	-3.4
1,817,387	-		MIT1002_01645	0.67	-2.1
1,817,387	-		MIT1002_01645	0.67	-1.7
1,817,512	-		MIT1002_01645	0.74	-1.9
1,817,515	+		MIT1002_01645	0.74	-0.9
1,817,624	-		MIT1002_01645	0.80	+0.5
1,817,663	+		MIT1002_01645	0.83	-2.0
1,817,766	+		MIT1002_01645	0.88	-2.7
1,817,866	-				-1.5
1,818,032	-				-1.9
1,818,124	+				-0.5
1,818,124	+				+0.1
1,818,132	-				+0.6
1,818,132	-				-1.1
1,818,132	-				-0.8
1,818,158	-				+0.8
1,818,160	-				-1.0
1,818,318	-				+0.3
1,818,328	+		MIT1002_01646	0.10	+0.4
1,818,349	+		MIT1002_01646	0.11	-0.2
1,818,357	-		MIT1002_01646	0.11	-1.2
1,818,391	-		MIT1002_01646	0.12	-0.4
1,818,406	-		MIT1002_01646	0.12	+0.2
1,818,414	+		MIT1002_01646	0.13	+0.0
1,818,437	-		MIT1002_01646	0.13	-1.4
1,818,582	+		MIT1002_01646	0.17	-0.2
1,818,629	+		MIT1002_01646	0.19	-0.5
1,818,687	-		MIT1002_01646	0.20	-0.3
1,818,702	+		MIT1002_01646	0.21	+0.3
1,818,710	-		MIT1002_01646	0.21	+0.1
1,818,786	+		MIT1002_01646	0.23	+0.1
1,818,949	+		MIT1002_01646	0.28	-0.5
1,818,954	+		MIT1002_01646	0.28	-1.1
1,818,957	-		MIT1002_01646	0.28	-2.6
1,818,957	-		MIT1002_01646	0.28	-1.3
1,818,957	-		MIT1002_01646	0.28	-1.4