Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01598

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,760,194	-		MIT1002_01597	0.51	+2.4
1,760,210	+		MIT1002_01597	0.53	+0.4
1,760,215	+		MIT1002_01597	0.54	+0.6
1,760,260	-		MIT1002_01597	0.59	+0.3
1,760,300	+		MIT1002_01597	0.64	+0.7
1,760,335	+		MIT1002_01597	0.68	+1.6
1,760,335	-		MIT1002_01597	0.68	+0.3
1,760,343	-		MIT1002_01597	0.69	+1.5
1,760,343	-		MIT1002_01597	0.69	+1.6
1,760,343	-		MIT1002_01597	0.69	+3.4
1,760,343	-		MIT1002_01597	0.69	-2.3
1,760,343	-		MIT1002_01597	0.69	+0.3
1,760,344	+		MIT1002_01597	0.69	-0.2
1,760,397	+		MIT1002_01597	0.76	-2.0
1,760,397	+		MIT1002_01597	0.76	+2.5
1,760,412	+		MIT1002_01597	0.78	+0.6
1,760,428	+		MIT1002_01597	0.79	-0.1
1,760,479	+		MIT1002_01597	0.86	-0.1
1,760,516	+				+1.2
1,760,525	-				+1.2
1,760,545	-				-0.1
1,760,669	-				-0.2
1,760,669	-				+0.5
1,760,724	-				-0.9
1,760,820	+				+0.1
1,760,820	+				-2.1
1,760,825	+				+0.8
1,760,828	-				-0.5
1,760,944	+				-0.1
1,760,980	-				+0.7
1,761,041	-				+0.3
1,761,051	-				+3.1
1,761,084	+				-0.3
1,761,164	-		MIT1002_01598	0.22	-0.8
1,761,204	+		MIT1002_01598	0.29	-0.5
1,761,219	+		MIT1002_01598	0.31	-1.0
1,761,311	-		MIT1002_01598	0.46	-0.8
1,761,326	+		MIT1002_01598	0.48	-2.3
1,761,492	-		MIT1002_01598	0.74	+0.9
1,761,704	-				+0.4
1,761,704	-				-0.1
1,761,933	-		MIT1002_01599	0.19	-1.1
1,761,957	-		MIT1002_01599	0.21	-1.0
1,761,969	+		MIT1002_01599	0.22	-2.6
1,761,969	+		MIT1002_01599	0.22	-0.2
1,761,969	+		MIT1002_01599	0.22	-0.3
1,761,977	-		MIT1002_01599	0.22	-0.2
1,761,977	-		MIT1002_01599	0.22	+1.2
1,761,977	-		MIT1002_01599	0.22	-1.0
1,761,988	+		MIT1002_01599	0.23	+0.5
1,762,108	+		MIT1002_01599	0.33	+1.5
1,762,113	-		MIT1002_01599	0.33	-1.1
1,762,116	-		MIT1002_01599	0.33	+0.9
1,762,116	-		MIT1002_01599	0.33	+1.5
1,762,121	-		MIT1002_01599	0.34	-0.4
1,762,196	+		MIT1002_01599	0.40	+0.4
1,762,267	+		MIT1002_01599	0.45	-1.3
1,762,267	+		MIT1002_01599	0.45	-0.1
1,762,273	-		MIT1002_01599	0.46	+0.2
1,762,433	+		MIT1002_01599	0.59	-0.3
1,762,443	+		MIT1002_01599	0.59	+0.9
1,762,443	+		MIT1002_01599	0.59	+1.2
1,762,443	+		MIT1002_01599	0.59	+0.6
1,762,443	+		MIT1002_01599	0.59	+0.0
1,762,451	-		MIT1002_01599	0.60	-0.1
1,762,465	+		MIT1002_01599	0.61	-0.2
1,762,465	+		MIT1002_01599	0.61	-0.9
1,762,473	-		MIT1002_01599	0.62	+0.9
1,762,473	-		MIT1002_01599	0.62	+0.9
1,762,492	+		MIT1002_01599	0.63	-0.4
1,762,506	+		MIT1002_01599	0.64	-0.5
1,762,521	-		MIT1002_01599	0.66	+1.4
1,762,580	-		MIT1002_01599	0.70	-0.9