Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01580

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,737,993	-		MIT1002_01579	0.54	-0.3
1,738,000	+		MIT1002_01579	0.54	-0.3
1,738,010	+		MIT1002_01579	0.55	+2.5
1,738,010	+		MIT1002_01579	0.55	+0.7
1,738,010	+		MIT1002_01579	0.55	+0.1
1,738,010	+		MIT1002_01579	0.55	+0.2
1,738,010	+		MIT1002_01579	0.55	-0.8
1,738,018	-		MIT1002_01579	0.56	+1.4
1,738,018	-		MIT1002_01579	0.56	-0.9
1,738,079	+		MIT1002_01579	0.60	+1.2
1,738,087	-		MIT1002_01579	0.61	-0.8
1,738,087	-		MIT1002_01579	0.61	+0.1
1,738,111	+		MIT1002_01579	0.63	+1.5
1,738,111	+		MIT1002_01579	0.63	-0.5
1,738,111	+		MIT1002_01579	0.63	-0.6
1,738,119	-		MIT1002_01579	0.63	+0.6
1,738,172	+		MIT1002_01579	0.67	-0.8
1,738,172	+		MIT1002_01579	0.67	-0.2
1,738,190	-		MIT1002_01579	0.68	+0.6
1,738,190	-		MIT1002_01579	0.68	-1.8
1,738,190	-		MIT1002_01579	0.68	-1.7
1,738,215	+		MIT1002_01579	0.70	+1.8
1,738,285	+		MIT1002_01579	0.76	-1.2
1,738,413	-		MIT1002_01579	0.85	-0.8
1,738,413	-		MIT1002_01579	0.85	+0.7
1,738,445	+		MIT1002_01579	0.88	+1.0
1,738,462	-		MIT1002_01579	0.89	-0.2
1,738,503	+				+1.5
1,738,511	-				+0.5
1,738,516	-				-0.6
1,738,523	-				-0.4
1,738,555	+				+0.1
1,738,563	-				-1.7
1,738,610	+				+0.7
1,738,869	-				+0.0
1,738,914	-				-0.2
1,738,975	-				-1.3
1,739,038	+		MIT1002_01580	0.11	+0.3
1,739,038	+		MIT1002_01580	0.11	+1.8
1,739,038	+		MIT1002_01580	0.11	-0.3
1,739,046	-		MIT1002_01580	0.11	-0.0
1,739,046	-		MIT1002_01580	0.11	+0.8
1,739,046	-		MIT1002_01580	0.11	-0.2
1,739,059	+		MIT1002_01580	0.13	-2.9
1,739,059	+		MIT1002_01580	0.13	+0.3
1,739,079	+		MIT1002_01580	0.15	-0.0
1,739,117	+		MIT1002_01580	0.19	-0.4
1,739,198	+		MIT1002_01580	0.27	+0.2
1,739,237	+		MIT1002_01580	0.31	-1.2
1,739,239	+		MIT1002_01580	0.31	-3.3
1,739,239	+		MIT1002_01580	0.31	-1.5
1,739,239	+		MIT1002_01580	0.31	-0.4
1,739,239	+		MIT1002_01580	0.31	+0.5
1,739,239	+		MIT1002_01580	0.31	+0.2
1,739,239	+		MIT1002_01580	0.31	+0.7
1,739,239	+		MIT1002_01580	0.31	-1.5
1,739,239	+		MIT1002_01580	0.31	-1.9
1,739,245	-		MIT1002_01580	0.31	-0.3
1,739,247	-		MIT1002_01580	0.32	-1.1
1,739,247	-		MIT1002_01580	0.32	+0.8
1,739,247	-		MIT1002_01580	0.32	-0.9
1,739,247	-		MIT1002_01580	0.32	+0.6
1,739,247	-		MIT1002_01580	0.32	-2.1
1,739,359	+		MIT1002_01580	0.43	+0.9
1,739,384	+		MIT1002_01580	0.45	-2.3
1,739,399	+		MIT1002_01580	0.47	-0.2
1,739,399	+		MIT1002_01580	0.47	-0.0
1,739,414	+		MIT1002_01580	0.48	-0.4
1,739,427	+		MIT1002_01580	0.50	-1.4
1,739,427	+		MIT1002_01580	0.50	+0.2
1,739,427	+		MIT1002_01580	0.50	-0.4
1,739,427	+		MIT1002_01580	0.50	+2.5
1,739,435	-		MIT1002_01580	0.50	-0.1
1,739,435	-		MIT1002_01580	0.50	+0.1
1,739,435	-		MIT1002_01580	0.50	-0.5
1,739,435	-		MIT1002_01580	0.50	+1.1
1,739,437	+		MIT1002_01580	0.51	-0.3
1,739,437	+		MIT1002_01580	0.51	+0.2
1,739,437	+		MIT1002_01580	0.51	+0.2
1,739,519	+		MIT1002_01580	0.59	+0.9
1,739,610	+		MIT1002_01580	0.68	+0.5
1,739,610	-		MIT1002_01580	0.68	-0.2
1,739,618	-		MIT1002_01580	0.69	+0.5
1,739,664	-		MIT1002_01580	0.73	-0.9
1,739,674	+		MIT1002_01580	0.74	+0.1
1,739,682	-		MIT1002_01580	0.75	-0.1
1,739,723	+		MIT1002_01580	0.79	+0.5
1,739,797	+		MIT1002_01580	0.87	+0.7
1,739,805	+		MIT1002_01580	0.87	-1.7
1,739,923	-				-0.2
1,739,944	-				-0.5
1,739,944	-				-1.7