Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01449

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,593,887	-				-0.7
1,593,914	-				-0.2
1,594,093	-				-0.5
1,594,104	+				+1.7
1,594,104	+				+0.8
1,594,104	+				+0.3
1,594,128	-				+0.8
1,594,135	-				-3.3
1,594,135	-				-0.7
1,594,145	-				+0.8
1,594,308	+		MIT1002_01448	0.28	+0.0
1,594,323	+		MIT1002_01448	0.30	+1.1
1,594,383	+		MIT1002_01448	0.38	-0.6
1,594,419	+		MIT1002_01448	0.42	-0.3
1,594,427	-		MIT1002_01448	0.43	+0.4
1,594,511	+		MIT1002_01448	0.54	+0.2
1,594,560	-		MIT1002_01448	0.61	+0.2
1,594,597	+		MIT1002_01448	0.65	-0.5
1,594,618	-		MIT1002_01448	0.68	+0.6
1,594,629	-		MIT1002_01448	0.70	-0.2
1,594,681	+		MIT1002_01448	0.76	+1.9
1,594,689	-		MIT1002_01448	0.77	+0.3
1,594,777	-		MIT1002_01448	0.89	+0.1
1,594,830	-				-2.0
1,594,876	+				-1.3
1,594,897	+				+0.8
1,594,919	+				+0.9
1,595,078	+		MIT1002_01449	0.21	-0.8
1,595,100	-		MIT1002_01449	0.23	-0.4
1,595,123	+		MIT1002_01449	0.25	+0.3
1,595,123	+		MIT1002_01449	0.25	+0.2
1,595,131	-		MIT1002_01449	0.26	+0.3
1,595,131	-		MIT1002_01449	0.26	+0.1
1,595,131	-		MIT1002_01449	0.26	+0.3
1,595,131	-		MIT1002_01449	0.26	-0.3
1,595,142	+		MIT1002_01449	0.27	-3.0
1,595,157	-		MIT1002_01449	0.28	-1.7
1,595,157	-		MIT1002_01449	0.28	+0.4
1,595,175	+		MIT1002_01449	0.30	+1.7
1,595,175	+		MIT1002_01449	0.30	-0.4
1,595,183	-		MIT1002_01449	0.31	+1.7
1,595,190	+		MIT1002_01449	0.31	-1.4
1,595,266	+		MIT1002_01449	0.38	+0.9
1,595,310	-		MIT1002_01449	0.43	+0.5
1,595,312	+		MIT1002_01449	0.43	+0.7
1,595,408	-		MIT1002_01449	0.52	+1.5
1,595,418	+		MIT1002_01449	0.53	+0.3
1,595,505	+		MIT1002_01449	0.61	-0.1
1,595,505	+		MIT1002_01449	0.61	+0.4
1,595,505	+		MIT1002_01449	0.61	-0.3
1,595,506	-		MIT1002_01449	0.61	+1.6
1,595,507	+		MIT1002_01449	0.61	-0.1
1,595,513	-		MIT1002_01449	0.62	-0.2
1,595,641	+		MIT1002_01449	0.73	+1.8
1,595,641	+		MIT1002_01449	0.73	-0.2
1,595,658	+		MIT1002_01449	0.75	+0.1
1,595,658	+		MIT1002_01449	0.75	+0.3
1,595,679	+		MIT1002_01449	0.77	+1.9
1,595,780	+		MIT1002_01449	0.86	-1.1
1,595,820	+				-0.7
1,595,830	+				-0.3
1,595,857	-				+2.4
1,595,972	-				+0.1
1,595,974	+				+1.5
1,596,052	+				+1.7
1,596,053	+				+0.9
1,596,061	-				-4.2
1,596,159	+		MIT1002_01450	0.17	+0.0
1,596,268	+		MIT1002_01450	0.24	-1.9
1,596,509	+		MIT1002_01450	0.41	+1.0
1,596,509	+		MIT1002_01450	0.41	-0.5
1,596,517	-		MIT1002_01450	0.41	-0.7
1,596,517	-		MIT1002_01450	0.41	-0.0
1,596,517	-		MIT1002_01450	0.41	-1.6
1,596,517	-		MIT1002_01450	0.41	-0.0
1,596,517	-		MIT1002_01450	0.41	-2.7
1,596,551	+		MIT1002_01450	0.44	+1.6
1,596,555	+		MIT1002_01450	0.44	+0.6
1,596,563	-		MIT1002_01450	0.45	-0.4
1,596,569	-		MIT1002_01450	0.45	+1.2
1,596,583	+		MIT1002_01450	0.46	-0.9
1,596,583	+		MIT1002_01450	0.46	+0.8
1,596,591	-		MIT1002_01450	0.47	+0.6
1,596,591	-		MIT1002_01450	0.47	-0.5
1,596,610	-		MIT1002_01450	0.48	+0.2
1,596,692	+		MIT1002_01450	0.54	-1.3
1,596,706	-		MIT1002_01450	0.55	-1.5
1,596,706	-		MIT1002_01450	0.55	+0.3
1,596,758	-		MIT1002_01450	0.58	-0.7
1,596,759	-		MIT1002_01450	0.58	+0.6
1,596,771	+		MIT1002_01450	0.59	-0.2
1,596,784	+		MIT1002_01450	0.60	+0.9
1,596,835	+		MIT1002_01450	0.64	+1.3
1,596,889	-		MIT1002_01450	0.67	+0.4