Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01423

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,566,713	+		MIT1002_01421	0.88	+0.2
1,566,721	-		MIT1002_01421	0.89	-0.3
1,566,796	+				-1.8
1,566,930	+		MIT1002_01422	0.49	-0.4
1,566,996	+		MIT1002_01422	0.73	-1.0
1,567,012	+		MIT1002_01422	0.79	-1.9
1,567,012	+		MIT1002_01422	0.79	-1.2
1,567,012	+		MIT1002_01422	0.79	-2.7
1,567,110	-				-1.9
1,567,120	-				+0.8
1,567,253	+				+0.7
1,567,271	+				-1.3
1,567,332	+				+1.4
1,567,472	+				+1.4
1,567,473	-				-0.7
1,567,486	+				+0.9
1,567,486	+				+1.0
1,567,486	+				+0.5
1,567,494	-				-0.7
1,567,496	+				+1.3
1,567,512	-				-0.4
1,567,514	+				+0.4
1,567,601	+				+0.4
1,567,601	+				+0.2
1,567,641	+				-0.0
1,567,679	+				+1.0
1,567,745	+				-2.6
1,567,753	-		MIT1002_01423	0.12	+1.7
1,567,846	+		MIT1002_01423	0.32	+0.1
1,567,854	-		MIT1002_01423	0.33	+0.9
1,567,854	-		MIT1002_01423	0.33	+1.1
1,567,854	-		MIT1002_01423	0.33	-1.1
1,567,912	+		MIT1002_01423	0.46	+0.2
1,567,971	+		MIT1002_01423	0.58	-0.4
1,568,008	+		MIT1002_01423	0.66	-1.5
1,568,054	+		MIT1002_01423	0.76	-0.3
1,568,054	+		MIT1002_01423	0.76	+1.1
1,568,084	-		MIT1002_01423	0.83	+0.6
1,568,131	-				+0.2
1,568,167	+				-0.8
1,568,169	+				+0.8
1,568,203	+				-0.4
1,568,203	-				+0.3
1,568,203	-				+0.4
1,568,203	-				-0.1
1,568,220	-				-1.1
1,568,361	+				+0.6
1,568,553	-		MIT1002_01424	0.18	+0.3
1,568,556	+		MIT1002_01424	0.19	-1.0
1,568,568	+		MIT1002_01424	0.23	-1.6
1,568,571	-		MIT1002_01424	0.24	-0.1
1,568,576	-		MIT1002_01424	0.26	-0.1
1,568,581	+		MIT1002_01424	0.28	-0.3
1,568,587	-		MIT1002_01424	0.30	+0.8
1,568,587	-		MIT1002_01424	0.30	-0.6
1,568,589	+		MIT1002_01424	0.30	+1.2
1,568,634	-		MIT1002_01424	0.45	-0.2
1,568,655	-		MIT1002_01424	0.52	-0.6
1,568,655	-		MIT1002_01424	0.52	+0.7
1,568,660	-		MIT1002_01424	0.54	-0.2
1,568,665	-		MIT1002_01424	0.56	-1.1
1,568,667	+		MIT1002_01424	0.56	-1.9
1,568,675	-		MIT1002_01424	0.59	+0.6
1,568,821	+				-2.6
1,568,821	+				-2.4
1,568,821	+				-1.6