Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01413

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,556,734	+		MIT1002_01412	0.39	-1.9
1,556,777	+		MIT1002_01412	0.43	-1.3
1,556,784	+		MIT1002_01412	0.44	+0.2
1,556,784	+		MIT1002_01412	0.44	+0.2
1,556,792	-		MIT1002_01412	0.45	+0.5
1,556,792	-		MIT1002_01412	0.45	+1.0
1,556,794	+		MIT1002_01412	0.45	+0.2
1,556,990	+		MIT1002_01412	0.65	-0.2
1,557,015	+		MIT1002_01412	0.68	-0.5
1,557,084	-		MIT1002_01412	0.75	-1.9
1,557,084	-		MIT1002_01412	0.75	-1.6
1,557,108	-		MIT1002_01412	0.77	+1.3
1,557,124	+		MIT1002_01412	0.79	-1.4
1,557,132	-		MIT1002_01412	0.80	+0.3
1,557,132	-		MIT1002_01412	0.80	-0.8
1,557,132	-		MIT1002_01412	0.80	-1.5
1,557,170	+		MIT1002_01412	0.83	+0.0
1,557,214	+		MIT1002_01412	0.88	-0.2
1,557,246	+				-1.8
1,557,287	+				+1.0
1,557,328	-				-0.3
1,557,401	+				+0.8
1,557,401	+				+1.1
1,557,502	-				+0.0
1,557,599	+				-2.9
1,557,687	-		MIT1002_01413	0.14	-1.6
1,557,713	+		MIT1002_01413	0.28	+0.4
1,557,734	-		MIT1002_01413	0.39	+0.3
1,557,773	+		MIT1002_01413	0.61	-1.4
1,557,797	+		MIT1002_01413	0.74	+1.8
1,557,797	+		MIT1002_01413	0.74	+1.1
1,557,968	-		MIT1002_01414	0.12	-0.1
1,557,973	-		MIT1002_01414	0.13	-1.4
1,558,006	-		MIT1002_01414	0.18	+1.2
1,558,086	+		MIT1002_01414	0.30	+1.6
1,558,148	-		MIT1002_01414	0.39	+2.1
1,558,153	+		MIT1002_01414	0.40	-1.2
1,558,251	+		MIT1002_01414	0.55	+0.6
1,558,253	+		MIT1002_01414	0.55	+0.8
1,558,254	-		MIT1002_01414	0.55	-0.5
1,558,254	-		MIT1002_01414	0.55	+0.8
1,558,259	-		MIT1002_01414	0.56	+0.5
1,558,259	-		MIT1002_01414	0.56	-1.8
1,558,376	+		MIT1002_01414	0.74	-3.2
1,558,390	-		MIT1002_01414	0.76	+2.1
1,558,393	+		MIT1002_01414	0.77	+0.8
1,558,571	+				+0.7
1,558,656	-		MIT1002_01415	0.13	+2.9
1,558,693	+		MIT1002_01415	0.19	+1.4
1,558,701	-		MIT1002_01415	0.20	+1.0
1,558,709	-		MIT1002_01415	0.21	-2.8
1,558,727	-		MIT1002_01415	0.23	-2.2
1,558,780	+		MIT1002_01415	0.31	-0.3