Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01356

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,499,163	+		MIT1002_01354	0.66	+1.9
1,499,175	+		MIT1002_01354	0.66	+0.8
1,499,191	+		MIT1002_01354	0.67	+0.4
1,499,191	+		MIT1002_01354	0.67	+0.2
1,499,197	-		MIT1002_01354	0.68	-1.7
1,499,199	-		MIT1002_01354	0.68	+0.6
1,499,225	-		MIT1002_01354	0.70	+0.2
1,499,328	+		MIT1002_01354	0.76	+1.2
1,499,336	-		MIT1002_01354	0.77	-0.7
1,499,358	-		MIT1002_01354	0.78	+0.6
1,499,368	-		MIT1002_01354	0.79	+0.9
1,499,694	-				-0.5
1,499,708	-				-0.7
1,499,715	+				+1.5
1,499,723	-				-0.5
1,499,724	-				-2.6
1,499,758	-		MIT1002_01355	0.12	+0.1
1,499,760	+		MIT1002_01355	0.13	+0.5
1,499,760	+		MIT1002_01355	0.13	-0.4
1,499,760	+		MIT1002_01355	0.13	+1.3
1,499,760	+		MIT1002_01355	0.13	+0.9
1,499,760	+		MIT1002_01355	0.13	+0.1
1,499,760	+		MIT1002_01355	0.13	+0.2
1,499,760	+		MIT1002_01355	0.13	+1.2
1,499,768	-		MIT1002_01355	0.15	-0.8
1,499,768	-		MIT1002_01355	0.15	-0.9
1,499,768	-		MIT1002_01355	0.15	-1.9
1,499,768	-		MIT1002_01355	0.15	+0.7
1,499,768	-		MIT1002_01355	0.15	-3.1
1,499,768	-		MIT1002_01355	0.15	+0.1
1,499,768	-		MIT1002_01355	0.15	+0.6
1,499,768	-		MIT1002_01355	0.15	-1.0
1,499,768	-		MIT1002_01355	0.15	+0.1
1,499,768	-		MIT1002_01355	0.15	-0.8
1,499,768	-		MIT1002_01355	0.15	-1.0
1,499,835	-		MIT1002_01355	0.30	+0.6
1,499,890	-		MIT1002_01355	0.42	-0.1
1,499,947	+		MIT1002_01355	0.55	+0.5
1,499,974	+		MIT1002_01355	0.61	+0.1
1,499,994	-		MIT1002_01355	0.66	-0.3
1,500,031	-		MIT1002_01355	0.74	+0.1
1,500,096	-		MIT1002_01355	0.89	+0.3
1,500,102	+				+0.5
1,500,122	-				+0.8
1,500,129	-				+0.4
1,500,234	+				-0.4
1,500,234	-				+0.9
1,500,316	-		MIT1002_01356	0.13	+0.2
1,500,352	-		MIT1002_01356	0.16	-1.5
1,500,391	+		MIT1002_01356	0.19	-1.3
1,500,457	-		MIT1002_01356	0.24	-2.1
1,500,484	+		MIT1002_01356	0.26	+0.0
1,500,492	-		MIT1002_01356	0.27	-2.4
1,500,493	-		MIT1002_01356	0.27	+1.5
1,500,558	-		MIT1002_01356	0.32	+0.7
1,500,558	-		MIT1002_01356	0.32	-0.3
1,500,654	+		MIT1002_01356	0.40	-0.5
1,500,662	-		MIT1002_01356	0.41	+0.1
1,500,676	+		MIT1002_01356	0.42	-0.4
1,500,684	-		MIT1002_01356	0.42	+0.2
1,500,755	+		MIT1002_01356	0.48	-1.7
1,500,899	+		MIT1002_01356	0.60	-0.2
1,500,907	-		MIT1002_01356	0.60	+0.1
1,500,917	-		MIT1002_01356	0.61	-0.4
1,500,941	+		MIT1002_01356	0.63	+0.4
1,500,974	+		MIT1002_01356	0.66	-1.8
1,501,036	+		MIT1002_01356	0.71	-1.4
1,501,069	-		MIT1002_01356	0.73	-3.9
1,501,149	+		MIT1002_01356	0.80	+0.3
1,501,306	+				+0.1
1,501,436	+				-1.1
1,501,558	+				-2.7
1,501,609	-				+0.2
1,501,609	-				+0.6
1,501,672	+				+0.5
1,501,682	+				+0.5
1,501,689	+				+1.6
1,502,051	-		MIT1002_01357	0.64	-0.7
1,502,053	+		MIT1002_01357	0.64	+1.5
1,502,072	+		MIT1002_01357	0.68	+1.6
1,502,090	-		MIT1002_01357	0.72	-0.8
1,502,257	+				+0.1
1,502,336	+				-0.8
1,502,336	+				+0.6
1,502,336	+				+0.6
1,502,344	-				-1.8
1,502,397	-		MIT1002_01358	0.13	+1.4