Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01318

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,463,699	+				+0.8
1,463,707	-				-1.2
1,463,707	-				-0.4
1,463,718	+		MIT1002_01317	0.11	-2.3
1,463,736	-		MIT1002_01317	0.13	+1.5
1,463,742	+		MIT1002_01317	0.14	+0.4
1,463,754	-		MIT1002_01317	0.15	+0.2
1,463,754	-		MIT1002_01317	0.15	+1.6
1,463,754	-		MIT1002_01317	0.15	-2.4
1,463,890	-		MIT1002_01317	0.32	-1.6
1,463,908	-		MIT1002_01317	0.35	-1.3
1,463,929	-		MIT1002_01317	0.37	-0.8
1,463,934	-		MIT1002_01317	0.38	+0.3
1,463,967	+		MIT1002_01317	0.42	+0.2
1,463,981	+		MIT1002_01317	0.44	+0.5
1,464,133	-		MIT1002_01317	0.63	+0.3
1,464,220	+		MIT1002_01317	0.74	-0.3
1,464,220	+		MIT1002_01317	0.74	+0.7
1,464,238	-		MIT1002_01317	0.76	-0.8
1,464,265	+		MIT1002_01317	0.79	-3.1
1,464,265	+		MIT1002_01317	0.79	+0.1
1,464,265	+		MIT1002_01317	0.79	-0.6
1,464,265	+		MIT1002_01317	0.79	+0.6
1,464,265	+		MIT1002_01317	0.79	+0.1
1,464,265	+		MIT1002_01317	0.79	+2.6
1,464,265	+		MIT1002_01317	0.79	+0.7
1,464,265	+		MIT1002_01317	0.79	+0.4
1,464,265	+		MIT1002_01317	0.79	-1.1
1,464,273	-		MIT1002_01317	0.80	-0.3
1,464,273	-		MIT1002_01317	0.80	-0.4
1,464,273	-		MIT1002_01317	0.80	-1.2
1,464,273	-		MIT1002_01317	0.80	-1.7
1,464,273	-		MIT1002_01317	0.80	-0.5
1,464,315	-		MIT1002_01317	0.86	+0.6
1,464,316	-		MIT1002_01317	0.86	-0.1
1,464,317	-		MIT1002_01317	0.86	-1.0
1,464,481	+				+1.0
1,464,486	+				+0.0
1,464,514	+				+0.4
1,464,540	+		MIT1002_01318	0.14	-0.3
1,464,548	-		MIT1002_01318	0.16	-2.9
1,464,557	+		MIT1002_01318	0.19	-0.4
1,464,584	+		MIT1002_01318	0.27	+0.9
1,464,592	-		MIT1002_01318	0.29	+0.2
1,464,630	-		MIT1002_01318	0.41	+0.4
1,464,659	+		MIT1002_01318	0.50	-2.1
1,464,667	-		MIT1002_01318	0.52	-2.1
1,464,667	-		MIT1002_01318	0.52	-1.8
1,464,721	+		MIT1002_01318	0.68	+0.9
1,464,746	-		MIT1002_01318	0.76	+0.6
1,464,757	+		MIT1002_01318	0.79	+0.5
1,464,782	+		MIT1002_01318	0.86	+0.8
1,464,800	-				+0.8
1,464,875	+				+0.0
1,464,923	-				-0.3
1,465,076	+		MIT1002_01319	0.25	-2.9
1,465,076	+		MIT1002_01319	0.25	+1.1
1,465,144	-		MIT1002_01319	0.48	+1.8
1,465,177	-		MIT1002_01319	0.58	+2.4
1,465,240	-		MIT1002_01319	0.79	-0.0
1,465,374	+				+1.1
1,465,382	+				+1.0
1,465,382	-				-1.2
1,465,414	-				-2.2
1,465,416	+				+0.3
1,465,417	+				+1.3
1,465,417	+				+0.8
1,465,450	-				-1.2
1,465,517	+		MIT1002_01320	0.10	+0.3
1,465,571	-		MIT1002_01320	0.13	-0.6
1,465,614	+		MIT1002_01320	0.16	-0.1
1,465,620	-		MIT1002_01320	0.16	-0.3
1,465,624	+		MIT1002_01320	0.17	+0.4
1,465,624	+		MIT1002_01320	0.17	+0.5
1,465,726	+		MIT1002_01320	0.23	+1.1
1,465,734	-		MIT1002_01320	0.23	-0.4
1,465,762	+		MIT1002_01320	0.25	-0.1
1,465,815	+		MIT1002_01320	0.28	+0.0
1,465,823	-		MIT1002_01320	0.28	+0.9
1,465,823	-		MIT1002_01320	0.28	+0.1