Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01243

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,370,235	+		MIT1002_01242	0.13	-1.5
1,370,248	-		MIT1002_01242	0.15	-1.4
1,370,323	-		MIT1002_01242	0.27	-0.8
1,370,634	+		MIT1002_01242	0.76	-1.8
1,370,680	+		MIT1002_01242	0.83	-1.4
1,370,687	-		MIT1002_01242	0.84	-1.5
1,370,689	-		MIT1002_01242	0.84	-0.3
1,370,786	+				+0.8
1,370,857	-				-1.0
1,370,963	+				-2.4
1,370,971	+				-2.1
1,371,024	+				+0.9
1,371,088	+				+0.2
1,371,196	-				-0.1
1,371,207	-				-0.9
1,371,224	+		MIT1002_01243	0.11	+1.9
1,371,232	-		MIT1002_01243	0.12	-1.9
1,371,325	-		MIT1002_01243	0.22	-0.8
1,371,388	+		MIT1002_01243	0.30	+0.3
1,371,392	+		MIT1002_01243	0.30	+2.7
1,371,400	-		MIT1002_01243	0.31	+1.4
1,371,401	+		MIT1002_01243	0.31	-0.0
1,371,410	-		MIT1002_01243	0.32	-2.2
1,371,447	-		MIT1002_01243	0.36	-0.8
1,371,462	+		MIT1002_01243	0.38	+1.3
1,371,468	-		MIT1002_01243	0.39	+0.6
1,371,470	-		MIT1002_01243	0.39	+0.3
1,371,494	+		MIT1002_01243	0.42	+1.0
1,371,498	-		MIT1002_01243	0.42	-2.0
1,371,537	+		MIT1002_01243	0.47	+1.4
1,371,550	+		MIT1002_01243	0.48	-0.8
1,371,674	+		MIT1002_01243	0.62	+0.6
1,371,676	+		MIT1002_01243	0.63	-1.1
1,371,676	+		MIT1002_01243	0.63	-0.6
1,371,698	+		MIT1002_01243	0.65	+1.3
1,371,698	+		MIT1002_01243	0.65	+0.4
1,371,698	+		MIT1002_01243	0.65	+0.4
1,371,698	+		MIT1002_01243	0.65	-0.6
1,371,698	+		MIT1002_01243	0.65	-1.8
1,371,698	+		MIT1002_01243	0.65	+1.1
1,371,698	+		MIT1002_01243	0.65	+0.6
1,371,698	+		MIT1002_01243	0.65	+0.1
1,371,706	-		MIT1002_01243	0.66	-0.6
1,371,706	-		MIT1002_01243	0.66	+0.7
1,371,706	-		MIT1002_01243	0.66	+1.1
1,371,754	+		MIT1002_01243	0.71	+0.6
1,371,783	+		MIT1002_01243	0.75	+0.2
1,371,790	+		MIT1002_01243	0.76	-1.5
1,371,797	-		MIT1002_01243	0.76	+0.4
1,371,910	+		MIT1002_01243	0.89	+0.7
1,371,969	-				+0.2
1,372,061	+				-0.8
1,372,061	+				-1.3
1,372,069	-				-1.3
1,372,069	-				-0.1
1,372,069	-				-0.5
1,372,096	+				-0.0
1,372,113	-				+0.7
1,372,115	+				+0.5
1,372,135	+				-1.7
1,372,143	-				+0.3
1,372,150	-				+0.7
1,372,176	+		MIT1002_01244	0.11	+0.9
1,372,176	+		MIT1002_01244	0.11	-0.8
1,372,176	+		MIT1002_01244	0.11	-0.6
1,372,176	+		MIT1002_01244	0.11	+0.1
1,372,176	+		MIT1002_01244	0.11	+0.6
1,372,184	-		MIT1002_01244	0.12	+0.5
1,372,184	-		MIT1002_01244	0.12	-0.2
1,372,184	-		MIT1002_01244	0.12	+1.9
1,372,184	-		MIT1002_01244	0.12	+1.4
1,372,184	-		MIT1002_01244	0.12	-1.3
1,372,208	+		MIT1002_01244	0.14	-1.7
1,372,316	+		MIT1002_01244	0.23	+0.2
1,372,332	-		MIT1002_01244	0.24	-0.2
1,372,343	+		MIT1002_01244	0.25	-0.1
1,372,343	+		MIT1002_01244	0.25	+0.4
1,372,351	-		MIT1002_01244	0.26	+1.7
1,372,351	-		MIT1002_01244	0.26	+0.2
1,372,415	+		MIT1002_01244	0.31	+0.3
1,372,417	-		MIT1002_01244	0.31	+0.5
1,372,559	-		MIT1002_01244	0.43	-0.1
1,372,621	-		MIT1002_01244	0.49	-1.1
1,372,709	-		MIT1002_01244	0.56	+1.0
1,372,709	-		MIT1002_01244	0.56	-1.2
1,372,928	+		MIT1002_01244	0.74	-3.4
1,372,971	-		MIT1002_01244	0.78	-2.7